Job Description Q80TT8 Confidence 57.50% Date Wed Jul 10 14:12:26 BST 2013 Rank 139 Aligned Residues 57 % Identity 12% Template c3pbpD_ PDB info PDB header:transport protein,structural protein Chain: D: PDB Molecule:nucleoporin nup82; PDBTitle: structure of the yeast heterotrimeric nup82-nup159-nup116 nucleoporin2 complex Resolution 2.60 Å

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		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	N	P	K	T	Y	W	E	S	N	G	S	T	G	S	H	S	I	T	L	H	M	H	R	G	V	L	I	R	Q	L	T	L	L	V	A	S	E	D	S	S	Y	M	P	A	R	V	V	V	F	G	G	D	N	V	G	C	I	S
Query Conservation
Alig confidence																														.														.	.	.
Template Conservation																														.														.	.	.
Template Sequence		D	L	E	X	S	X	S	W	D	V	D	N	Y	V	Y	N	N	S	L	V	L	I	E	R	V	K	L	Q	.	R	E	I	K	S	L	I	T	L	P	E	Q	L	.	.	.	G	K	L	Y	V	I	S	D	N	I	I	Q	Q	V	N
Template Known Secondary structure			S						S	S		T	T	B		S	S													.	S									T	T	S	T	.	.	.	T							S	S
Template Predicted Secondary structure																														.														.	.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370				.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
		584
Predicted Secondary structure
Query SS confidence
Query Sequence		T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		386

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D