Job Description Q80TT8 Confidence 46.87% Date Wed Jul 10 14:12:26 BST 2013 Rank 156 Aligned Residues 346 % Identity 15% Template c3nmzB_ PDB info PDB header:cell adhesion/cell cycle Chain: B: PDB Molecule:apc variant protein; PDBTitle: crytal structure of apc complexed with asef Resolution 3.01 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		L	R	E	K	L	V	K	T	L	V	D	L	L	T	N	.	.	.	.	Q	V	G	E	K	M	V	V	V	M	A	L	R	L	L	Y	L	L	M	T	K	H	E	W	R	P	L	F	A	R	E	G	G	I	Y	A	V	L	I	C	M
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.
Template Conservation
Template Sequence		R	Q	S	G	C	L	P	L	L	I	Q	L	L	H	G	N	D	K	N	S	R	G	S	K	E	A	R	A	R	A	S	A	A	L	H	N	I	I	H	S	Q	P	D	D	K	R	G	R	R	E	I	R	V	L	H	L	L	E	Q	I
Template Known Secondary structure					T										T																									S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	Y	K	T	S	V	L	V	Q	Q	A	G	L	A	A	L	K	M	L	A	I	A	N	S	S	D	V	P	T	F	I	P	S	R	D	S	I	Q	P	L	F	D	T	Q	M	T	R	E	I	F	A	S	I	D	S	A	T	R	P
Query Conservation
Alig confidence																																																									.	.	.	.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		R	A	Y	C	E	T	C	W	E	W	Q	E	A	H	E	P	G	M	D	Q	D	K	N	P	A	P	V	E	H	Q	I	C	P	A	V	C	V	L	M	K	L	S	F	D	E	E	H	R	H	A	M	N	E	L	G	.	.	.	.	.
Template Known Secondary structure															T	S	T	T	S				S						G	G	G	T											T	T	S										T	T	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
		179	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.
Predicted Secondary structure							.	.																																												.	.	.	.
Query SS confidence							.	.																																												.	.	.	.
Query Sequence		G	S	E	S	L	.	.	L	L	S	V	P	A	A	V	V	L	M	L	N	T	E	G	C	S	S	A	V	R	N	G	L	L	L	L	N	L	L	L	C	N	H	H	T	L	G	D	Q	I	I	.	.	.	.	T	Q	E	L	R	D
Query Conservation							.	.																																												.	.	.	.
Alig confidence							.	.																																												.	.	.	.
Template Conservation
Template Sequence		G	L	Q	A	I	A	E	L	L	Q	V	D	C	E	M	Y	G	L	T	N	D	H	Y	S	I	T	L	R	R	Y	A	G	M	A	L	T	N	L	T	F	G	D	V	A	N	K	A	T	L	C	S	M	K	G	C	M	R	A	L	V
Template Known Secondary structure																	S	T	T																						T	T
Template Predicted Secondary structure
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	F	R	H	S	G	I	A	P	G	T	E	P	M	P	T	T	R	T	I	L	T	M	L	L	S	R	Y	S	E	P	R	G	S	P	E	R	A	V	L	E	T	P	S	T	Q	G	Q	D	G	S	P	E	S	L	I	R	S	L
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Template Sequence		A	Q	L	K	.	.	.	.	.	.	.	.	S	E	S	E	D	L	Q	Q	V	I	A	S	V	L	R	N	L	S	W	R	A	D	V	N	S	K	K	T	L	R	.	.	.	.	.	.	E	V	G	S	V	K	A	L	M	E	C	A
Template Known Secondary structure			G	G	G	.	.	.	.	.	.	.	.		S																T	S	S											.	.	.	.	.	.		T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.																															.	.	.	.	.	.
Template SS confidence
		531	.	.	.									.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.							.	.	.	.	.	570	.	.	.	.	.	.
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.						.	.
Predicted Secondary structure																																																							.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.
Query Sequence		V	G	D	L	S	A	E	L	F	L	D	L	E	R	V	L	C	H	E	G	S	P	P	A	A	V	R	P	L	L	R	R	L	Q	Q	E	T	Q	P	F	L	L	L	L	R	T	L	D	A	P	G	P	N	.	.	.	.	.	R	T
Query Conservation																																																							.	.	.	.	.
Alig confidence																																									.	.	.												.	.	.	.	.
Template Conservation																																									.	.	.
Template Sequence		L	E	V	K	K	E	S	T	L	K	S	V	L	S	A	L	W	N	L	S	A	H	C	T	E	N	K	A	D	I	C	A	V	D	G	A	L	A	F	.	.	.	L	V	G	T	L	T	Y	R	S	Q	T	N	T	L	A	I	I	E
Template Known Secondary structure		T	T			S															T	T	T											S	T	T					.	.	.					T	T				S	S	S	T	T
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.				.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.			.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		L	L	L	T	I	L	R	V	M	T	R	L	L	D	H	P	E	.	.	T	M	V	L	P	W	H	E	V	L	E	P	C	L	N	C	L	N	G	P	S	S	D	S	E	V	V	Q	E	V	T	C	F	L	H	R	L	A	L	M	Q
Query Conservation																			.	.
Alig confidence																			.	.																					.	.
Template Conservation																																									.	.
Template Sequence		S	G	G	G	I	L	R	N	V	S	S	L	I	A	T	N	E	D	H	R	Q	I	L	R	E	N	N	C	L	Q	T	L	L	Q	H	L	K	S	H	.	.	S	L	T	I	V	S	N	A	C	G	T	L	W	N	L	S	A	R	N
Template Known Secondary structure															T	T											T	T										T		S	.	.																S	S	S
Template Predicted Secondary structure																																									.	.
Template SS confidence
		634	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.			.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	Y	A	V	V	L	C	C	L	G	G	K	E	A	L	S	K	V	L	D	K	H	S	T	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	K	D	Q	E	A	L	W	D	M	G	A	V	S	M	L	K	N	L	I	H	S	K	H	K	M	I
Template Known Secondary structure										T	T	T						T	T	S	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		692	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D