Job Description Q80TT8 Confidence 26.92% Date Wed Jul 10 14:12:26 BST 2013 Rank 237 Aligned Residues 346 % Identity 11% Template c3l6yE_ PDB info PDB header:cell adhesion Chain: E: PDB Molecule:catenin delta-1; PDBTitle: crystal structure of p120 catenin in complex with e-cadherin Resolution 3.00 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		R	E	K	L	V	K	T	L	V	D	L	L	T	N	Q	V	G	E	K	M	V	V	V	M	A	L	R	L	L	Y	L	L	.	M	T	K	H	E	W	R	P	L	F	A	R	E	G	G	I	Y	A	V	L	I	C	M	Q	E	Y	K
Query Conservation																																		.
Alig confidence																	.	.																.																										.	.
Template Conservation																	.	.																																										.	.
Template Sequence		R	Q	P	E	L	P	E	V	I	A	M	L	G	F	R	.	.	L	D	A	V	K	S	N	A	A	A	Y	L	Q	H	L	C	Y	R	N	D	K	V	K	T	D	V	R	K	L	K	G	I	P	V	L	V	G	L	L	D	H	.	.
Template Known Secondary structure													T	T	S	S	.	.																	T	T											T	T									T	T		.	.
Template Predicted Secondary structure																	.	.																																										.	.
Template SS confidence
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.			.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.								.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.
Query Sequence		T	S	V	L	V	Q	Q	A	G	L	A	A	L	K	M	L	A	I	A	N	S	S	D	.	.	.	.	.	.	.	V	P	T	F	I	P	S	R	D	S	I	Q	P	L	F	D	T	Q	M	T	R	E	I	F	A	S	I	D	S	A
Query Conservation																									.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	K	K	E	V	H	L	G	A	C	G	A	L	K	N	I	S	F	G	R	D	Q	D	N	K	I	A	I	K	N	C	D	G	V	P	A	L	V	R	L	L	R	K	A	R	D	M	D	L	T	E	V	I	T	G	T	L	W	N	L
Template Known Secondary structure		S	S															T	S	S	S											T	T														S
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.
		176	.	.	.	180	.														.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	R	P	G	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	L	L	S	V	P	A	A	V	V	L	M	L	N	T	E	G	C	S	S	A	V	R	N	G	L	L	L	L	N	L	L	L	C	N	H	H	T	L	G
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	H	D	S	I	K	M	E	I	V	D	H	A	L	H	A	L	T	D	E	V	I	I	P	H	S	G	W	E	R	E	P	R	H	I	E	W	E	S	V	L	T	N	T	A	G	C	L	R	N	V	S	S	E	R	S	E	A	R
Template Known Secondary structure			T	S																			T						T							S																		T	S	S
Template Predicted Secondary structure
Template SS confidence
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
		223	.	.	.					.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.				.	.
Predicted Secondary structure						.	.	.	.																																																.	.	.
Query SS confidence						.	.	.	.																																																.	.	.
Query Sequence		D	Q	I	I	.	.	.	.	T	Q	E	L	R	D	T	L	F	R	H	S	G	I	A	P	G	T	E	P	M	P	T	T	R	T	I	L	T	M	L	L	S	R	Y	S	E	P	R	G	S	P	E	R	A	V	L	.	.	.	E	T
Query Conservation						.	.	.	.																																																.	.	.
Alig confidence						.	.	.	.																																																.	.	.
Template Conservation
Template Sequence		R	K	L	R	E	C	D	G	L	V	D	A	L	I	F	I	V	Q	A	E	I	G	Q	K	D	S	D	S	K	L	V	E	N	C	V	C	L	L	R	N	L	S	Y	Q	V	H	R	E	I	P	Q	A	E	R	Y	S	P	A	R	G
Template Known Secondary structure						T	S	T	T														T	T	T		S																	T	T					S	T	T									G
Template Predicted Secondary structure
Template SS confidence
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	T	Q	G	Q	D	G	S	P	E	S	L	I	R	S	L	V	G	D	L	S	A	E	L	F	L	D	L	E	R	V	L	C	H	E	G	S	P	P	A	A	V	R	P	L	L	R	R	L	Q	Q	E	T	Q	P	F	L	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	L	L	F	Q	P	E	V	V	R	I	Y	I	S	L	L	K	E	S	K	T	P	A	I	L	E	A	S	A	G	A	I	Q	N	L	C	A	G	R	W	T	Y	G	R	Y	I	R	S	A	L	R	Q	E	K	A	L	S	A	I
Template Known Secondary structure		G	G	G	G	G	S																																	S		S											T	S
Template Predicted Secondary structure
Template SS confidence
		650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	T	L	D	A	P	G	P	N	R	T	L	L	L	T	I	L	R	V	M	T	R	L	L	D	H	P	E	T	M	V	L	P	W	H	E	V	L	E	P	C	L	N	C	L	N	G	P	S	S	D	S	E	V	V	Q	E	V	T
Query Conservation
Alig confidence						.	.																																										.	.
Template Conservation						.	.																																										.	.
Template Sequence		A	D	L	L	.	.	T	N	E	H	E	R	V	V	K	A	A	S	G	A	L	R	N	L	A	V	D	A	R	N	K	E	L	I	G	K	H	A	I	P	N	L	V	K	N	L	P	.	.	N	F	S	E	D	T	V	I	S	I	L
Template Known Secondary structure				G	G	.	.	G		S																G	G	G		S																			.	.
Template Predicted Secondary structure						.	.																																										.	.
Template SS confidence
		710	.	.	.			.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.			.	.	.	.	.	760	.	.	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	F	L	H	R	L	A	L	M	Q	K	D	Y	A	V	V	L	C	C	L	G	G	K	E	A	L	S	K	V	L	D	K	H	S
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	T	I	N	E	V	I	A	.	.	.	.	.	.	.	.	.	.	.	.	E	G	I	E	K	L	V	L	I	N	K	S	R	S
Template Known Secondary structure								T		.	.	.	.	.	.	.	.	.	.	.	.											T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		774	.	.	.	.	.	780	.													.	.	.	.	.	.	.	.	790	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D