Job Description Q80TT8 Confidence 96.10% Date Wed Jul 10 14:12:26 BST 2013 Rank 33 Aligned Residues 84 % Identity 19% Template c3l11A_ PDB info PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase rnf168; PDBTitle: crystal structure of the ring domain of rnf168 Resolution 2.12 Å

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		1394	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	V	P	Q	A	Q	V	V	P	T	R	P	D	Q	C	P	V	C	V	T	P	L	G	P	H	D	D	S	P	S	L	C	C	L	H	C	C	C	K	S	C	W	N	E	Y	L	T	T	R	I	E	Q	N	F	V	L	N	C	T
Query Conservation
Alig confidence																									.	.	.																									.	.	.	.	.	.	.
Template Conservation																									.	.	.																									.	.	.	.	.	.	.
Template Sequence		M	A	L	P	K	D	A	I	P	S	L	S	E	C	Q	C	G	I	C	M	E	I	L	.	.	.	V	E	P	V	T	L	P	C	N	H	T	L	C	K	P	C	F	Q	S	T	V	E	K	A	.	.	.	.	.	.	.	S	L	C
Template Known Secondary structure						T	T									B		T	T	T		S	B		.	.	.	S	S					T	T	S												T	T	T	T	.	.	.	.	.	.	.	T	S	B
Template Predicted Secondary structure																									.	.	.																									.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.								.	.	50
		1454	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	I	A	D	C	P	A	Q	P	T	G	A	F	I	R	N	I	V	S	S	P	E	V	I	S	K	Y	E	K	A	L	L	R	G	Y
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence		C	P	F	.	.	C	R	R	R	V	S	S	W	T	R	Y	H	T	R	R	N	S	L	V	N	V	E	L	W	T	I	I	Q	K	H	Y
Template Known Secondary structure			T	T	.	.	T			B											T	T			B												S
Template Predicted Secondary structure					.	.
Template SS confidence
		51	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D