Job Description Q80TT8 Confidence 96.14% Date Wed Jul 10 14:12:26 BST 2013 Rank 32 Aligned Residues 120 % Identity 13% Template c3hnmD_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:putative chitobiase; PDBTitle: crystal structure of protein bt_411 (putative chitobiase,2 fragment 298-461) from bacteroides thetaiotaomicron,3 northeast structural genomics consortium target btr319d Resolution 3.00 Å

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		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.				540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.					560	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.																					.	.	.	.
Query SS confidence																											.	.	.																					.	.	.	.
Query Sequence		N	P	H	R	A	S	K	L	T	D	R	N	P	K	T	Y	W	E	S	N	G	S	T	G	S	.	.	.	H	S	I	T	L	H	M	H	R	G	V	L	I	R	Q	L	T	L	L	V	.	.	.	.	A	S	E	D	S	S	Y	M
Query Conservation																											.	.	.																					.	.	.	.
Alig confidence																											.	.	.																					.	.	.	.
Template Conservation
Template Sequence		X	G	W	G	V	E	S	L	I	D	N	N	P	G	T	Q	W	L	C	R	W	D	V	K	E	P	L	P	Y	Y	F	V	F	D	X	G	K	E	Y	T	L	F	R	F	G	F	A	N	P	V	A	P	A	A	H	V	W	A	G	T
Template Known Secondary structure		T	T		S	G	G	G	T	T	S	S	S	T	T	S						S	S	S				S																								T	T		S		S	S
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.			.	620	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		P	A	R	V	V	V	F	G	G	D	N	V	G	C	I	S	T	E	L	N	T	V	N	V	M	P	S	A	S	R	V	T	L	L	E	N	L	T	R	F	W	P	I	I	Q	I	R	I	K	R	C	.	.	Q	Q	G	G	I	D	T
Query Conservation																																																					.	.
Alig confidence																.																																					.	.
Template Conservation																.
Template Sequence		S	K	A	G	Y	V	E	A	S	I	D	N	E	N	.	W	V	K	L	K	D	W	T	S	P	K	I	G	E	P	N	V	N	X	D	V	P	A	T	Q	A	R	Y	I	R	F	V	I	T	D	T	Y	P	T	Y	D	G	L	R	V
Template Known Secondary structure											S	S	S	S	S	.										S	S	T	T		S																									T	T	S	S
Template Predicted Secondary structure																.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		626	.	.	.	630	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	R	G	V	E	V	L	G	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L	G	E	V	Y	A	W	G	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D