Job Description Q80TT8 Confidence 83.56% Date Wed Jul 10 14:12:26 BST 2013 Rank 100 Aligned Residues 73 % Identity 21% Template c3hctA_ PDB info PDB header:signaling protein/ligase Chain: A: PDB Molecule:tnf receptor-associated factor 6; PDBTitle: crystal structure of traf6 in complex with ubc13 in the p12 space group Resolution 2.10 Å

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		1393	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	R	V	P	Q	A	Q	V	V	P	T	R	P	D	Q	C	P	V	C	V	T	P	L	G	P	H	D	D	S	P	S	L	C	C	L	H	C	C	C	K	S	C	W	N	E	Y	L	T	T	R	I	E	Q	N	F	V	L	N	C
Query Conservation
Alig confidence							.																			.	.	.																															.	.
Template Conservation							.																			.	.	.																															.	.
Template Sequence		G	Y	D	V	E	.	F	D	P	P	L	E	S	K	Y	E	C	P	I	C	L	M	A	L	.	.	.	R	E	A	V	Q	T	P	C	G	H	R	F	C	K	A	C	I	I	K	S	I	R	D	A	G	H	K	C	P	V	.	.	D
Template Known Secondary structure			B		S		.	B	S	S				G	G	G	B		T	T	T		S	B		.	.	.	S	S					T	T	S																	S	B		T	T	.	.	T
Template Predicted Secondary structure							.																			.	.	.																															.	.
Template SS confidence
		55	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.
		1453	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	C	P	I	A	D	C	P	A	Q	P	T	G	A	F	I	R	N	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	E	I	L	L	E	N	Q	L	F	P	D	N	F	A	K	R	E	I
Template Known Secondary structure				B			G	G	G
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D