Job Description Q80TT8 Confidence 95.32% Date Wed Jul 10 14:12:26 BST 2013 Rank 38 Aligned Residues 119 % Identity 16% Template c2yc2A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:intraflagellar transport protein 25; PDBTitle: intraflagellar transport complex 25-27 from chlamydomonas Resolution 2.59 Å

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		507	.	.	510	.	.	.	.	.	.	.	.			.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		W	E	K	V	E	V	S	S	N	P	H	R	.	.	A	S	K	L	T	D	R	N	P	K	T	Y	W	E	S	N	G	S	T	G	S	H	S	I	T	L	H	M	H	R	G	V	L	I	R	Q	L	T	L	L	V	A	S	E	D	S
Query Conservation														.	.
Alig confidence														.	.																			.																					.	.	.
Template Conservation																																		.																					.	.	.
Template Sequence		G	L	V	V	M	A	S	C	S	D	E	R	F	P	P	E	N	M	L	D	G	K	D	N	T	F	W	V	T	T	G	M	.	F	P	Q	E	F	V	L	R	L	E	S	C	I	R	V	S	K	I	T	T	.	.	.	L	S	L	N
Template Known Secondary structure								S				T	T	S		G	G	G	G	G	S	S		T	T							S	S	.	S																				.	.	.				S
Template Predicted Secondary structure																																		.																					.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Y	M	P	A	R	V	V	V	F	G	G	D	N	V	G	C	I	S	T	E	L	N	T	V	N	V	M	P	S	A	S	R	V	T	L	L	E	N	L	T	R	F	W	P	I	I	Q	I	R	I	K	R	C	Q	Q	G	G	I	D
Query Conservation
Alig confidence				.																.																								.	.	.
Template Conservation				.																.																								.	.	.
Template Sequence		V	R	.	K	L	A	V	E	K	C	D	Q	D	K	P	D	Q	F	.	E	K	V	F	E	V	E	L	A	N	R	R	L	Q	T	E	V	H	Q	V	N	I	R	.	.	.	A	K	Y	L	K	F	I	L	L	Q	G	H	G	E	F
Template Known Secondary structure				.									S	S	S					.																								.	.	.												S	S	S
Template Predicted Secondary structure				.																.																								.	.	.
Template SS confidence
		67	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		625	.	.	.	.	630	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	V	R	G	V	E	V	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	V	N	R	V	S	V	V	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D