Job Description Q80TT8 Confidence 20.11% Date Wed Jul 10 14:12:26 BST 2013 Rank 291 Aligned Residues 56 % Identity 23% Template c2voaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:exodeoxyribonuclease iii; PDBTitle: structure of an ap endonuclease from archaeoglobus fulgidus Resolution 1.7 Å

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		1486	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.											.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	G	Y	V	E	S	C	S	N	L	T	W	C	T	N	P	Q	G	.	.	.	.	.	.	.	.	.	.	C	D	R	I	L	C	R	Q	G	L	G	S	G	T	T	C	S	K	C	G	W	A	S	C	F	S	C	S	F	P	E
Query Conservation																					.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.																											.
Template Conservation																																																									.
Template Sequence		L	R	K	I	H	P	N	E	R	I	Y	T	F	Y	D	Y	R	V	K	G	A	I	E	R	G	L	G	W	R	G	D	A	I	L	A	T	P	P	L	A	E	R	C	V	D	C	Y	A	D	I	K	P	R	L	A	.	E	K	P	S
Template Known Secondary structure							T	T					S	B			T	T	S	T	T	T	T	T	T	T			B													T	T													S	.	S	S
Template Predicted Secondary structure																																																									.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.
		1536	.	.	.	1540	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	Y	P	A	S	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	H	L	P	L	V	A
Template Known Secondary structure		S	B
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D