Job Description Q80TT8 Confidence 94.29% Date Wed Jul 10 14:12:26 BST 2013 Rank 49 Aligned Residues 128 % Identity 12% Template c2v72A_ PDB info PDB header:sugar-binding protein Chain: A: PDB Molecule:exo-alpha-sialidase; PDBTitle: the structure of the family 32 cbm from c. perfringens nanj2 in complex with galactose Resolution 2.25 Å

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		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.			.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540				.	.	.	.	.	.	.	.	.	550	.	.	.
Predicted Secondary structure																				.	.																									.	.	.
Query SS confidence																				.	.																									.	.	.
Query Sequence		V	E	V	K	E	D	R	C	W	E	K	V	E	V	S	S	N	P	.	.	H	R	A	S	K	L	T	D	R	N	P	K	T	Y	W	E	S	N	G	S	T	G	S	H	.	.	.	S	I	T	L	H	M	H	R	G	V	L	I	R
Query Conservation																				.	.																									.	.	.
Alig confidence																				.	.																									.	.	.
Template Conservation
Template Sequence		I	E	T	A	I	P	Q	S	E	M	T	A	S	A	T	S	E	E	G	Q	D	P	A	S	S	A	I	D	G	N	I	N	T	M	W	H	T	K	W	N	G	S	D	A	L	P	Q	S	L	S	V	N	L	G	K	A	R	K	V	S
Template Known Secondary structure					B			G	G	G						S	S		B	T	T	B		G	G	G	G	S	S	S		T	T							T	T	S		S		S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		554	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.			.	.	.	.	.	.	610	.
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		Q	L	T	L	L	V	A	S	E	D	S	S	Y	M	P	A	R	V	V	V	F	G	G	D	N	V	G	C	I	S	T	E	L	N	T	V	N	V	M	P	S	A	S	R	V	T	L	L	E	N	.	.	L	T	R	F	W	P	I	I
Query Conservation																																																				.	.
Alig confidence																														.																						.	.					.	.	.	.
Template Conservation																														.																												.	.	.	.
Template Sequence		S	I	A	I	T	P	R	T	S	G	N	N	G	F	I	T	K	Y	E	I	H	A	I	N	N	G	V	E	.	T	L	V	A	E	G	T	W	E	E	N	N	L	V	K	T	V	T	F	D	S	P	I	D	A	E	E	.	.	.	.
Template Known Secondary structure									S	S			T	T												T	T			.										S	S	S	S															.	.	.	.
Template Predicted Secondary structure																														.																												.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	R	I	K	R	C	Q	Q	G	G	I	D	T	R	V	R	G	V	E	V
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	I	K	I	T	A	I	Q	G	V	G	G	F	A	S	I	A	E	L	N	V
Template Known Secondary structure		.									G	G	G					S
Template Predicted Secondary structure		.
Template SS confidence
			117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D