Return to main results Retrieve Phyre Job Id

Job DescriptionQ80TT8
Confidence25.00%DateWed Jul 10 14:12:26 BST 2013
Rank250Aligned Residues43
% Identity21%Templatec2lriC_
PDB info PDB header:transcriptionChain: C: PDB Molecule:autoimmune regulator; PDBTitle: nmr structure of the second phd finger of aire (aire-phd2)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1571........1580.........1590.........1600.........1610. .....
Predicted Secondary structure 

























..




Query SS confidence 








































. .




Query Sequence  ISKRCPSCQAPIEKNEGCLHMTCARCNHGFCWRCLKSWKPS. . HKDYY
Query Conservation 


 

 


 


























 
 ..




Alig confidence 










...


























..




Template Conservation         
  
...     

 

 
    
  
  
     
   
 
Template Sequence  NLAPGARCGVC. . . GDGTDVLRCTHCAAAFHWRCHFPAGTSRPGTGLR
Template Known Secondary structure 


TT


TTT...S

TT

SSS



TTT



SSS

Template Predicted Secondary structure 





...






















Template SS confidence 















































   8.10........ .20.........30.........40.........50..
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D