Job Description Q80TT8 Confidence 93.82% Date Wed Jul 10 14:12:26 BST 2013 Rank 57 Aligned Residues 64 % Identity 23% Template c2l0bA_ PDB info PDB header:ligase Chain: A: PDB Molecule:e3 ubiquitin-protein ligase praja-1; PDBTitle: solution nmr structure of zinc finger domain of e3 ubiquitin-protein2 ligase praja-1 from homo sapiens, northeast structural genomics3 consortium (nesg) target hr4710b Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1394	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	V	P	Q	A	Q	V	V	P	T	R	P	D	Q	C	P	V	C	V	T	P	L	G	P	H	D	D	S	P	S	L	C	C	L	H	C	C	C	K	S	C	W	N	E	Y	L	T	T	R	I	E	Q	N	F	V	L	N	C	T
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.
Template Sequence		I	L	V	T	E	D	H	G	A	V	G	Q	E	M	C	C	P	I	C	C	S	E	Y	V	K	G	D	V	A	T	E	L	P	C	H	H	Y	F	H	K	P	C	V	S	I	W	L	Q	K	S	G	.	.	.	.	.	.	.	.	T
Template Known Secondary structure						T	T		S	S	S	S	S		S			T	T	T	T					T	T							T	T	T													T	T	T		.	.	.	.	.	.	.	.	B
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.									.
		1454	.	.	.	.	.	1460	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	I	A	D	C	P	A	Q	P	T	G	A	F
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence		C	P	V	.	.	C	R	C	M	F	P	P	P	L
Template Known Secondary structure			T	T	.	.	T			B	S	S
Template Predicted Secondary structure					.	.
Template SS confidence
		80	.	.			.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D