Job Description Q80TT8 Confidence 97.88% Date Wed Jul 10 14:12:26 BST 2013 Rank 22 Aligned Residues 67 % Identity 21% Template c2jmoA_ PDB info PDB header:ligase Chain: A: PDB Molecule:parkin; PDBTitle: ibr domain of human parkin Resolution UNK

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		1474	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	E	V	I	S	K	Y	E	K	A	L	L	R	G	Y	V	E	S	C	S	N	L	T	W	C	T	N	P	Q	G	C	D	R	I	L	C	R	Q	G	L	G	S	G	T	T	C	S	K	C	G	W	A	S	C	F	S	C	S	F
Query Conservation
Alig confidence																									.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	E	E	Q	Y	N	R	Y	Q	Q	Y	G	A	E	E	C	V	L	Q	M	G	G	V	.	L	C	P	R	P	G	C	G	A	G	L	L	P	E	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S				S	S	S			S	S				S	S		.				S	S	S									S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.
		1534	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	A	H	Y	P	A	S	C	G	H	M	S	Q	W	V	D	D	G	G	Y	Y	D	G	M	S	V	E	A	Q	S	K	H	L	A	K	L	I	S	K	R	C	P	S	C	Q	A	P	I	E	K	N	E	G	C	L	H	M	T	C
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	K	V	T	C	E	G	G	N	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	B		T	T	S	S	S	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																			43	.	.	.	.	.	.	50	.	.	.
		1594	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	C	N	H	G	F	C	W	R	C	L	K	S	W	K	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	C	G	F	A	F	C	R	E	C	K	E	A	Y	H	E
Template Known Secondary structure		T			S					T	T	T	T					S
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D