Return to main results Retrieve Phyre Job Id

Job DescriptionQ80TT8
Confidence94.23%DateWed Jul 10 14:12:26 BST 2013
Rank51Aligned Residues118
% Identity14%Templatec2j22A_
PDB info PDB header:carbohydrate-binding proteinChain: A: PDB Molecule:fucolectin-related protein; PDBTitle: structure of a streptococcus pneumoniae fucose binding2 module, spx-3
Resolution1.8 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   513......520.........530........ .540.........550.........560.......
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Query Sequence  SSNPHRASKLTDRNPKTYWESNGSTG. . . . . SHSITLHMHRGVLIRQLTLLVASEDSSYM
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Template Sequence  TDYNGFSRLAVDGNKNGDYGHHSVTHTKEDSPSWWEIDLAQTEELEKLIIYNRTDAEIQR
Template Known Secondary structure 

TT

GGGGGSS




GGGT





S
TT


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GGG
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   27..30.........40.........50.........60.........70.........80......
 
   568.570.........580.........590.........600.........610.........620.......
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Query Sequence  PARVVVFGGDNVGCISTELNTVNVMPSASRVTLLENLTRFWPIIQIRIKRCQQGGIDTRV
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Template Sequence  LSNFDIIIYDSN. DYEVFTQHIDSLESNNLSIDLKGLKGKKVRISLR. . . . . SAGIPLSL
Template Known Secondary structure  S
TT.S

SSSS.....STT



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   87..90........ .100.........110.........120.........130.. .......140
 
   628.630......
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Query Sequence  RGVEVLGPK
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Template Sequence  AEVEVYTYK
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   141........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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