Job Description Q80TT8 Confidence 20.65% Date Wed Jul 10 14:12:26 BST 2013 Rank 285 Aligned Residues 66 % Identity 17% Template c2e6rA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:jumonji/arid domain-containing protein 1d; PDBTitle: solution structure of the phd domain in smcy protein Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1557	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.		.	1610	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		G	M	S	V	E	A	Q	S	K	H	L	A	K	L	I	S	K	R	C	P	S	C	Q	A	P	I	E	K	N	E	G	C	L	H	M	T	C	A	R	C	N	H	G	F	C	W	R	C	L	K	S	W	.	K	P	S	H	K	D	Y
Query Conservation																																																						.
Alig confidence																											.	.	.																									.
Template Conservation																											.	.	.
Template Sequence		G	S	S	G	S	S	G	H	S	S	A	Q	F	I	D	S	Y	I	C	Q	V	C	S	R	G	.	.	.	D	E	D	D	K	L	L	F	C	D	G	C	D	D	N	Y	H	I	F	C	L	L	P	P	L	P	E	I	P	R	G	I
Template Known Secondary structure					S	S															S	S	S			S	.	.	.	G	G	G	G	G					T	T	T						S	S	S	S	S	S			S	S			S	S
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
		1616	.	.	.	1620	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	N	C	S	A	M	V	S	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	R	C	P	K	C	I	L	A	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D