Return to main results Retrieve Phyre Job Id

Job DescriptionQ80TT8
Confidence91.86%DateWed Jul 10 14:12:26 BST 2013
Rank75Aligned Residues60
% Identity22%Templatec1x4jA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:ring finger protein 38; PDBTitle: solution structure of ring finger in ring finger protein 38
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1398.1400.........1410.........1420.........1430.........1440.........1450.......
Predicted Secondary structure 





























Query SS confidence 



























































Query Sequence  QAQVVPTRPDQCPVCVTPLGPHDDSPSLCCLHCCCKSCWNEYLTTRIEQNFVLNCTCPIA
Query Conservation   
   
  
  



   
       

 
 
 


 

 



 




 
 

 



Alig confidence 














































........




Template Conservation             
 


             
 
 

  

  

    ........ 

 
Template Sequence  NPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANR. . . . . . . . TCPIC
Template Known Secondary structure 
SSS
SSS

TTTT

BT
TTTTT
S........S
TTT
Template Predicted Secondary structure 

























........




Template SS confidence 



























































   15....20.........30.........40.........50.........60. .....
 
   1458.1460.....
Predicted Secondary structure 






Query SS confidence 







Query Sequence  DCPAQPTG
Query Conservation   
 



 
Alig confidence 







Template Conservation 
  
   
Template Sequence  RADSGPSS
Template Known Secondary structure 







Template Predicted Secondary structure 







Template SS confidence 







   67..70....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D