Job Description Q80TT8 Confidence 89.63% Date Wed Jul 10 14:12:26 BST 2013 Rank 88 Aligned Residues 61 % Identity 21% Template c1rmdA_ PDB info PDB header:dna-binding protein Chain: A: PDB Molecule:rag1; PDBTitle: rag1 dimerization domain Resolution 2.10 Å

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		1407	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	C	P	V	C	V	T	P	L	G	P	H	D	D	S	P	S	L	C	C	L	H	C	C	C	K	S	C	W	N	E	Y	L	T	T	R	I	E	Q	N	F	V	L	N	C	T	C	P	I	A	D	C	P	A	Q	P	T	G	A
Query Conservation
Alig confidence																			.	.	.															.	.
Template Conservation																			.	.	.															.	.
Template Sequence		I	S	C	Q	I	C	E	H	I	L	A	D	P	V	E	T	S	.	.	.	C	K	H	L	F	C	R	I	C	I	L	R	C	L	.	.	K	V	M	G	S	Y	C	P	S	C	R	Y	P	C	F	P	T	D	L	E	S	P	V	K
Template Known Secondary structure		T	B		T	T	T		S	B		S	S					T	.	.	.	T	S													.	.			T		S	B		T	T	T			B			G	G	G		B
Template Predicted Secondary structure																			.	.	.															.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		1467	.	.	1470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	R	N	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	F	L	N	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D