Job Description Q80TT8 Confidence 79.61% Date Wed Jul 10 14:12:26 BST 2013 Rank 108 Aligned Residues 79 % Identity 27% Template c1dgsB_ PDB info PDB header:ligase Chain: B: PDB Molecule:dna ligase; PDBTitle: crystal structure of nad+-dependent dna ligase from t.2 filiformis Resolution 2.90 Å

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		1386	.	.	.	1390	.	.	.	.	.	.	.												.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	P	L	L	L	A	A	G	L	R	V	P	.	.	.	.	.	.	.	.	.	.	.	Q	A	Q	V	V	P	T	R	P	D	Q	C	P	V	C	V	T	P	L	G	P	H	D	D	S	P	S	L	C	C	L	H	C	C	C	K	S
Query Conservation														.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	V	L	V	H	K	A	G	G	V	I	P	E	V	L	R	V	L	K	E	R	R	T	G	K	E	R	P	I	R	W	P	E	A	C	P	E	C	G	H	R	L	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T	T									G	G	G			S				B					S	B		T	T	T			B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2372	.	.	.	.	.	.	.	2380	.	.	.	.	.	.	.	.	.	2390	.	.	.	.	.	.	.	.	.	2400	.	.	.	.	.	.	.	.	.	2410	.	.	.	.	.
		1435	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.			.	.							.	.	.	.	.	.	1480	.	.	.	.	.	.
Predicted Secondary structure																																							.	.			.	.	.	.	.	.
Query SS confidence																																							.	.			.	.	.	.	.	.
Query Sequence		C	W	N	E	Y	L	T	T	R	I	E	Q	N	F	V	L	N	C	T	C	P	I	A	D	C	P	A	Q	P	T	G	A	F	I	R	N	I	.	.	V	S	.	.	.	.	.	.	S	P	E	V	I	S	K	Y	E	K	A	L	L
Query Conservation																																							.	.			.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.											.	.															.	.			.	.	.	.	.	.											.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.											.	.																																			.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	E	G	K	V	H	R	C	P	N	P	.	.	L	C	P	A	K	R	F	E	A	I	R	H	Y	A	S	R	K	A	M	D	I	E	G	L	G	E	K	L	I	E	R	L	L	E	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.		T	T							T	.	.	T		G	G	G										S	T	T	T	T			T	T												.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.											.	.																																			.	.	.
Template SS confidence
													2416	.	.	.	2420	.	.	.	.	.			.	.	.	.	2430	.	.	.	.	.	.	.	.	.	2440	.	.	.	.	.	.	.	.	.	2450	.	.	.	.	.	.	.	.	.
		1487	.	.	1490	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	Y	V	E	S	C	S	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	L	V	R	D	V	A	D	L
Template Known Secondary structure			T	S		S	S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		2460	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D