Job Description Q9QXE4 Confidence 3.10% Date Tue Jul 30 12:59:04 BST 2013 Rank 70 Aligned Residues 66 % Identity 14% Template c3km5B_ PDB info PDB header:cell invasion Chain: B: PDB Molecule:lysine specific cysteine protease; PDBTitle: crystal structure analysis of the k2 cleaved adhesin domain of lys-2 gingipain (kgp) Resolution 1.40 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																													.	.	.	.
Query SS confidence																													.	.	.	.
Query Sequence		D	F	I	D	T	C	P	G	F	S	A	E	E	E	E	E	D	E	D	I	G	E	E	S	S	A	E	.	.	.	.	H	T	S	V	F	S	C	L	P	A	S	L	E	C	L	T	D	T	S	D	S	C	F	L	Q	F	E	S	C
Query Conservation																													.	.	.	.
Alig confidence																.													.	.	.	.
Template Conservation																.
Template Sequence		D	F	T	E	T	F	E	S	S	T	H	G	E	A	.	P	A	E	W	T	T	I	D	A	D	G	D	G	Q	G	W	L	C	L	S	S	G	Q	L	D	W	L	T	A	H	G	G	S	N	V	V	S	S	F	S	W	N	G	M	A
Template Known Secondary structure								T	T	S		T	T	S		.		T	T						T	T		S	S								T	T	T		T	T				S	S	S	S							S	B	S	S	S	B
Template Predicted Secondary structure																.
Template SS confidence
		1158	.	1160	.	.	.	.	.	.	.	.	.	1170	.		.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.
		91	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	E	E	S	W	F	I	T	P	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	N	P	D	N	Y	L	I	S	K	D
Template Known Secondary structure											S
Template Predicted Secondary structure
Template SS confidence
		1217	.	.	1220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D