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Job DescriptionP35235
Confidence100.00%DateWed Jul 10 14:25:20 BST 2013
Rank28Aligned Residues254
% Identity100%Templatec3jrlA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:oncogenic tyrosine phosphatase shp2; PDBTitle: crystal structure of the oncogenic tyrosine phosphatase shp2 complexed2 with a salicylic acid-based small molecule inhibitor
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   263......270.........280.........290.........300.........310.........320..
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Query Sequence  YSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSK
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Template Sequence  YSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMP. . . . . . . . . .
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GGGSGGGGGG
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   263......270.........280.........290.........300.........310..
 
   323......330.........340.........350.........360.........370.........380..
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Query Sequence  PKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGV
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Template Sequence  . KKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEYALKEYGV
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TTTTT


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   324.....330.........340.........350.........360.........370.........380..
 
   383......390.........400.........410.........420.........430.........440..
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Query Sequence  MRVRNVKESAAHDYTLRELKLSKVGQALLQGNTERTVWQYHFRTWPDHGVPSDPGGVLDF
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Template Sequence  MRVRNVKESAAHDYTLRELKLSKV. . . . GQGNTERTVWQYHFRTWPDHGVPSDPGGVLDF
Template Known Secondary structure 
SST....T
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   383......390.........400...... ...410.........420.........430........
 
   443......450.........460.........470.........480.........490.........500..
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Query Sequence  LEEVHHKQESIVDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVR
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Template Sequence  LEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIREKGVDCDIDVPKTIQMVR
Template Known Secondary structure  TSTT


SSSSS
TTS


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   439440.........450.........460.........470.........480.........490........
 
   503......510.........520.........530.
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Query Sequence  SQRSGMVQTEAQYRFIYMAVQHYIETLQR
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Template Conservation   

   
 
  

 
 
  
   
     
Template Sequence  SQRSGMVQTEAQYRFIYMAVQHYIETLQR
Template Known Secondary structure  TTSTT
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   499500.........510.........520.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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