Job Description P35235 Confidence 100.00% Date Wed Jul 10 14:25:20 BST 2013 Rank 16 Aligned Residues 282 % Identity 37% Template c2pa5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:tyrosine-protein phosphatase non-receptor type 9; PDBTitle: crystal structure of human protein tyrosine phosphatase ptpn9 Resolution 1.60 Å Model Dimensions (Å) X:64.810 Y:51.805 Z:44.736

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		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	L	N	T	T	R	I	N	A	A	E	I	E	S	R	V	R	E	L	S	K	L	A	E	T	T	D	K	V	K	Q	G	F	W	E	E	F	E	T	L	Q	Q	Q	E	C	K	L	L	Y	S	R	K	E	G	Q	R	Q	E	N
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																							.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		H	V	P	G	P	H	A	M	T	I	Q	E	L	V	D	Y	V	N	A	R	Q	.	.	.	.	.	.	.	.	.	K	Q	G	I	Y	E	E	Y	E	D	I	R	R	E	N	P	V	G	.	.	T	F	H	C	S	M	S	P	G	N
Template Known Secondary structure		B		S		S	S		B														.	.	.	.	.	.	.	.	.														S			S	S	.	.							S	T	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.										300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.			.	.	320	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	N	K	N	R	Y	K	N	I	L	P	F	D	H	T	R	V	V	L	H	D	G	D	P	N	E	P	V	S	D	Y	I	N	A	N	I	I	M	P	E	F	E	T	K	C	N	N	S	K	P	K	K	S	Y	I	A	T	Q	G	C
Query Conservation
Alig confidence																								.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Sequence		L	E	K	N	R	Y	G	D	V	P	C	L	D	Q	T	R	V	K	L	T	K	Q	.	.	.	.	.	.	T	D	Y	I	N	A	S	F	M	.	.	.	.	.	.	.	.	D	G	Y	K	Q	K	N	A	Y	I	G	T	Q	G	P
Template Known Secondary structure		G	G	G		S		T	T					T	T	T								.	.	.	.	.	.		S								.	.	.	.	.	.	.	.			B	T
Template Predicted Secondary structure																								.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.							350	.	.	.	.	.	.	.	.									.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.		.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		L	Q	N	T	V	N	D	F	W	R	M	V	F	Q	E	N	S	R	V	I	V	M	T	T	K	E	V	E	R	G	K	S	K	C	V	K	Y	W	P	D	.	E	Y	A	L	K	E	Y	G	V	M	R	V	R	N	V	K	E	S	A
Query Conservation																																										.
Alig confidence																																										.
Template Conservation
Template Sequence		L	E	N	T	Y	R	D	F	W	L	M	V	W	E	Q	K	V	L	V	I	V	M	T	T	R	F	E	E	G	G	R	R	K	C	G	Q	Y	W	P	L	E	K	D	S	R	I	R	F	G	F	L	T	V	T	N	L	G	V	E	N
Template Known Secondary structure			G	G	G											T	T								S		S			T	T								S			S	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		A	H	D	Y	T	L	R	E	L	K	L	S	K	V	G	Q	A	L	L	Q	G	N	T	E	R	T	V	W	Q	Y	H	F	R	T	W	P	D	H	G	V	P	S	D	P	G	G	V	L	D	F	L	E	E	V	H	H	K	Q	E	.
Query Conservation																																																													.
Alig confidence															.	.	.	.	.																																										.
Template Conservation															.	.	.	.	.
Template Sequence		M	N	H	Y	K	K	T	T	L	E	I	H	N	.	.	.	.	.	T	E	E	R	Q	K	R	Q	V	T	H	F	Q	F	L	S	W	P	D	Y	G	V	P	S	S	A	A	S	L	I	D	F	L	R	V	V	R	N	Q	Q	S	L
Template Known Secondary structure			S	S											.	.	.	.	.	T	T	T	T															S	S	S	S		S		S
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		439	440	.	.	.	.	.	.	.	.	.	450	.						.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
					452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	S	I	V	D	A	G	P	V	V	V	H	C	S	A	G	I	G	R	T	G	T	F	I	V	I	D	I	L	I	D	I	I	R	E	K	G	V	D	C	D	I	D	V	P	K	T	I	Q	M	V	R	S	Q	R	S	G	M
Query Conservation		.	.	.
Alig confidence		.	.	.																																					.	.	.
Template Conservation																																									.	.	.
Template Sequence		A	V	S	N	M	G	A	E	P	P	I	V	V	H	C	S	A	G	I	G	R	T	G	T	F	C	S	L	D	I	C	L	A	Q	L	E	E	L	G	.	.	.	T	L	N	V	F	Q	T	V	S	R	M	R	T	Q	R	A	F	S
Template Known Secondary structure																	S	S	S	S																				S	.	.	.		B										T	T	T	S	T	T
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.				.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	T	E	A	Q	Y	R	F	I	Y	M	A	V	Q	H	Y	I	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	T	P	E	Q	Y	Y	F	C	Y	K	A	I	L	E	F	A	E	K
Template Known Secondary structure		S		S
Template Predicted Secondary structure
Template SS confidence
		558	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D