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Job DescriptionP35235
Confidence99.87%DateWed Jul 10 14:25:20 BST 2013
Rank86Aligned Residues101
% Identity28%Templatec2lctA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:proto-oncogene vav; PDBTitle: solution structure of the vav1 sh2 domain complexed with a syk-derived2 doubly phosphorylated peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110.........120.........130.........140.........150.........160....
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Query Sequence  ADPTSERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGK
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Template Sequence  QDLSVHLWYAGPMERAGAESILANRS. DGTFLVRQRVKDAAEFAISIKY. . . . . . . . . . N
Template Known Secondary structure  S
STTSSSS

S
.TTB

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S
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   664.....670.........680......... 690.........700.........710. .
 
   165....170.........180.........190.........200..... ....210......
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Query Sequence  SKVTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKNPMVET. LGTVLQLKQPL
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Template Sequence  VEVKHIKIMTAEGLYRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPF
Template Known Secondary structure  SS
TTSSSSSSSTTS
SSS





B
S
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   713......720.........730.........740.........750.........760.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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