Return to main results Retrieve Phyre Job Id

Job DescriptionP35235
Confidence99.89%DateWed Jul 10 14:25:20 BST 2013
Rank73Aligned Residues103
% Identity37%Templatec2gsbA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:ras gtpase-activating protein 1; PDBTitle: solution structure of the second sh2 domain of human ras2 gtpase-activating protein 1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   101........ 110.........120.........130.........140.........150.........
Predicted Secondary structure 








.



























Query SS confidence 








.

















































Query Sequence  PLNCADPTS. ERWFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGE
Query Conservation 
        .  



 
 
 


  
     

 



 
    
 
 

         
Alig confidence 








.











































......
Template Conservation              

 
 


  

  
      
 



 
        


  ......
Template Sequence  SGREEDPHEGKIWFHGKISKQEAYNLLMTVGQVCSFLVRPSDNTPGDYSLYFRT. . . . . .
Template Known Secondary structure 
SS


SGGG
SSB

SS
T

SS
SSSTT

......
Template Predicted Secondary structure 































......
Template SS confidence 



























































   6...10.........20.........30.........40.........50.........
 
   160.........170.........180.........190.........200.........210.......
Predicted Secondary structure 























Query SS confidence 

























































Query Sequence  SNDGKSKVTHVMIRCQELKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVLQLKQPLN
Query Conservation         
 
  
        
     
 

  

  
   
 

       
  
  
Alig confidence  ....









































....







Template Conservation  ....   
 
  
              
 

  

  
        ....  
  


Template Sequence  . . . . NENIQRFKICPTPNNQFMMGGRYYNSIGDIIDHYRKEQIVEG. . . . YYLKEPVP
Template Known Secondary structure  ....SS
B



TTTSS

BS
TTS
SBTT....B






Template Predicted Secondary structure  ....



















....





Template SS confidence 

























































   60.........70.........80.........90.........100. ........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D