Job Description P35235 Confidence 100.00% Date Wed Jul 10 14:25:20 BST 2013 Rank 39 Aligned Residues 277 % Identity 16% Template c1g4wR_ PDB info PDB header:signaling protein Chain: R: PDB Molecule:protein tyrosine phosphatase sptp; PDBTitle: crystal structure of the salmonella tyrosine phosphatase2 and gtpase activating protein sptp Resolution 2.20 Å

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		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	T	T	R	I	N	A	A	E	I	E	S	R	V	R	E	L	S	K	L	A	E	T	T	D	K	V	K	Q	G	F	W	E	E	F	E	T	L	Q	Q	Q	E	C	K	L	L	Y	S	R	K	E	G	Q	R	Q	E	N	K	N
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	G	V	A	R	F	S	Q	W	E	V	E	R	W	V	.	.	.	.	.	.	.	.	.	.	D	A	S	T	H	E	L	T	Q	A	V	K	K	I	H	V	I	A	K	E	L	K	N	V	T	A	E	L	E	K	I	P	Q	T	M
Template Known Secondary structure		S	S	S	S		G	G	G								.	.	.	.	.	.	.	.	.	.																														T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.											.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																								.																																					.
Query SS confidence																								.																																					.
Query Sequence		K	N	R	Y	K	N	I	L	P	F	D	H	T	R	V	V	L	H	D	G	D	P	.	N	E	P	V	S	D	Y	I	N	A	N	I	I	M	P	E	F	E	T	K	C	N	N	S	K	P	K	K	S	Y	I	A	T	Q	G	C	.
Query Conservation																								.																																					.
Alig confidence																								.															.	.	.	.	.	.	.	.	.														.
Template Conservation																																							.	.	.	.	.	.	.	.	.
Template Sequence		S	G	P	T	L	G	L	A	R	F	A	V	S	S	I	P	I	N	Q	Q	T	Q	V	K	L	S	D	G	M	P	V	P	V	N	T	L	T	.	.	.	.	.	.	.	.	.	F	D	G	K	P	V	A	L	A	G	S	Y	P	K
Template Known Secondary structure							S			S	S		T	T	T	S				S	T	T					T	T											.	.	.	.	.	.	.	.	.		T	T									S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.										.	.	340	.	.	.	.	.	.	.	.	.	350	.
			334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	L	Q	N	T	V	N	D	F	W	R	M	V	F	Q	E	N	S	R	V	I	V	M	T	T	K	E	V	E	R	G	K	S	K	C	V	K	Y	W	P	D	E	Y	A	L	K	E	Y	G	V	M	R	V	R	N	V	K	E	S	A
Query Conservation		.
Alig confidence		.																																								.	.	.
Template Conservation																																										.	.	.
Template Sequence		N	T	P	D	A	L	E	A	H	M	K	M	L	L	E	K	E	C	S	C	L	V	V	L	T	S	E	D	Q	M	Q	A	K	Q	L	P	P	Y	F	R	.	.	.	G	S	Y	T	F	G	E	V	H	T	N	S	Q	K	V	S	S
Template Known Secondary structure		S	S															T		S												T	T	T	T				T	T	T	.	.	.	S					T	T									G	G
Template Predicted Secondary structure																																										.	.	.
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.				.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		393	.	.		.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		A	H	D	.	Y	T	L	R	E	L	K	L	S	K	V	G	Q	A	L	L	Q	G	N	T	E	R	T	V	W	Q	Y	H	F	R	T	W	P	D	H	G	V	P	S	D	P	G	G	V	L	D	F	L	E	E	V	H	H	K	Q	E
Query Conservation					.
Alig confidence					.											.	.	.	.	.
Template Conservation																.	.	.	.	.
Template Sequence		A	S	Q	G	E	A	I	D	Q	Y	N	M	Q	L	.	.	.	.	.	S	C	G	E	K	R	Y	T	I	P	V	L	H	V	K	N	W	P	D	H	Q	P	L	P	S	T	D	Q	L	E	Y	L	A	D	R	V	K	N	S	N	Q
Template Known Secondary structure		G	S		S	T	T									.	.	.	.	.			T	T												S			T	T	S			S	S													T	S
Template Predicted Secondary structure																.	.	.	.	.
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.						.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
		452	.	.	.	.							.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.
Query Sequence		S	I	V	D	A	.	.	.	.	.	.	G	P	V	V	V	H	C	S	A	G	I	G	R	T	G	T	F	I	V	I	D	I	L	I	D	I	I	R	E	K	G	V	D	C	D	I	D	V	P	K	T	I	Q	M	V	R	S	Q	R
Query Conservation							.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.
Template Sequence		N	G	A	P	G	R	S	S	S	D	K	H	L	P	M	I	H	C	L	G	G	V	G	R	T	G	T	M	A	A	A	L	V	L	K	D	.	.	.	.	.	.	.	N	P	H	S	N	L	E	Q	V	R	A	D	F	R	D	S	R
Template Known Secondary structure					T	T		S		T	T	S	S						S	S	S	S	S															.	.	.	.	.	.	.		T	T														T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.
Template SS confidence
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.								500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
		506	.		.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		S	G	.	M	V	Q	T	E	A	Q	Y	R	F	I	Y	M	A	V	Q	H	Y	I
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		N	N	R	M	L	E	D	A	S	Q	F	V	Q	L	K	A	M	Q	A	Q	L	L
Template Known Secondary structure			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D