Return to main results Retrieve Phyre Job Id

Job DescriptionQ5BN45
Confidence9.13%DateTue Jul 30 13:19:44 BST 2013
Rank7Aligned Residues18
% Identity33%Templatec2dt7A_
PDB info PDB header:rna binding proteinChain: A: PDB Molecule:splicing factor 3a subunit 3; PDBTitle: solution structure of the second surp domain of human2 splicing factor sf3a120 in complex with a fragment of3 human splicing factor sf3a60
ResolutionUNK
Model Dimensions (Å)X:19.935 Y:24.430 Z:15.172

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   135....140.........150..
Predicted Secondary structure 












Query SS confidence 

















Query Sequence  EKSLVTGPDNHITHYDRL
Query Conservation    
 
 
           
Alig confidence 

















Template Conservation 
  
 









 

Template Sequence  ELNAISGPNEFAEFYNRL
Template Known Secondary structure 
SS


S

Template Predicted Secondary structure 




Template SS confidence 

















   71........80........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D