Job Description Q9Z0R4 Confidence 97.57% Date Tue Jul 30 13:06:10 BST 2013 Rank 341 Aligned Residues 347 % Identity 11% Template c4h8sA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:dcc-interacting protein 13-beta; PDBTitle: crystal structure of human appl2barph domain Resolution 3.50 Å

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		1195	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.		1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		G	L	F	P	S	N	Y	V	K	L	T	T	D	M	D	P	S	Q	Q	W	C	S	D	L	H	.	L	L	D	M	L	T	P	T	E	R	K	R	Q	G	Y	I	H	E	L	I	V	T	E	E	N	Y	V	N	D	L	Q	L	V	T
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		A	V	D	K	L	L	L	E	E	A	L	Q	D	S	P	Q	T	R	S	L	L	S	V	F	E	E	D	A	G	T	L	T	D	Y	T	N	Q	L	L	Q	A	M	Q	R	V	Y	G	A	Q	N	E	M	C	L	A	T	Q	Q	L	S
Template Known Secondary structure								S	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		1254	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	F	Q	K	P	L	T	E	S	E	L	L	T	E	K	E	V	A	M	I	F	V	N	W	K	E	L	I	M	C	N	I	K	L	L	K	A	L	R	V	R	K	K	M	S	G	E	K	M	P	V	K	M	I	G	D	I	L	S
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		K	Q	L	L	A	.	.	Y	E	K	Q	N	F	A	D	E	E	V	I	S	T	L	H	Y	F	S	K	V	V	D	E	L	N	L	L	H	T	E	L	A	K	Q	L	A	D	T	M	V	L	P	I	I	Q	F	R	E	K	D	L	T
Template Known Secondary structure					T	T	.	.	G	G	G	S																																				T										T
Template Predicted Secondary structure							.	.
Template SS confidence
		63	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		1314	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.							.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.
Query Sequence		A	Q	L	P	H	M	Q	P	Y	I	R	F	C	S	C	Q	L	N	G	A	A	L	I	Q	Q	K	T	D	E	A	P	.	.	.	.	.	.	D	F	K	E	F	V	K	R	L	A	M	D	P	R	C	K	G	M	P	L	S	S	F
Query Conservation																																	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.
Template Conservation
Template Sequence		E	V	S	T	L	K	D	L	F	G	L	A	S	N	E	H	D	L	S	M	A	K	Y	S	R	L	P	K	K	K	E	N	E	K	V	K	T	E	V	G	K	E	V	A	A	A	R	R	K	Q	H	L	S	S	L	Q	Y	Y	C	A
Template Known Secondary structure																											S		S	T	T
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		1368	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.		.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.						1420	.
Predicted Secondary structure																																						.																	.	.	.	.	.
Query SS confidence																																						.																	.	.	.	.	.
Query Sequence		I	L	K	P	M	Q	R	V	T	R	Y	P	L	I	I	K	N	I	L	E	N	T	P	E	N	H	P	D	H	S	H	L	K	H	A	L	.	E	K	A	E	E	L	C	S	Q	V	N	E	G	V	R	E	.	.	.	.	.	K	E
Query Conservation																																						.																	.	.	.	.	.
Alig confidence									.	.																												.																	.	.	.	.	.
Template Conservation									.	.
Template Sequence		L	N	A	L	Q	Y	R	.	.	K	Q	M	A	M	M	E	P	M	I	G	F	A	H	G	Q	I	N	F	F	K	K	G	A	E	M	F	S	K	R	M	D	S	F	L	S	S	V	A	D	M	V	Q	S	I	Q	V	E	L	E	A
Template Known Secondary structure									.	.																											S
Template Predicted Secondary structure									.	.
Template SS confidence
		185	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		1422	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450		.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.								.	1470	.	.	.
Predicted Secondary structure																															.																			.	.	.	.	.	.	.
Query SS confidence																															.																			.	.	.	.	.	.	.
Query Sequence		N	S	D	R	L	E	W	I	Q	A	H	V	Q	C	E	G	L	S	E	Q	L	V	F	N	S	V	T	N	C	.	L	G	P	R	K	F	L	H	S	G	K	L	Y	K	A	K	S	N	.	.	.	.	.	.	.	K	E	L	Y	G
Query Conservation																															.																			.	.	.	.	.	.	.
Alig confidence																															.																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	E	K	M	R	V	S	Q	Q	E	L	L	S	V	D	E	S	V	Y	T	P	D	S	D	V	A	A	P	Q	I	N	R	N	L	I	Q	K	A	G	Y	L	N	L	R	N	K	T	G	L	V	T	T	T	W	E	R	L	Y	F
Template Known Secondary structure																S		T	T	T	T		T	T	S		S	S	S						S		S													S	S	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		1474	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	F	N	D	F	L	L	L	T	Q	I	T	K	P	L	G	S	S	G	T	D	K	V	F	S	P	K	S	N	L	Q	Y	K	M	Y	K	T	P	I	F	L	N	E	V	L	V	K	L	P	T	D	P	S	G	D	E	P	I	F
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	T	Q	G	G	N	L	M	C	Q	P	R	G	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	G	L	I	Q	D	L	D	N	C	S	V	M	A	V	D	C	E	D	R	R	Y	C	F	Q
Template Known Secondary structure					S	S							T	T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S					B		S	S										T	T		S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.																				.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		1534	.	.		.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		H	I	S	.	H	I	D	R	V	Y	T	L	R	A	E	S	I	N	E	R	T	A	W	V	Q	K	I	K	A	A	S	E
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		I	T	T	P	N	G	K	S	G	I	I	L	Q	A	E	S	R	K	E	N	E	E	W	I	C	A	I	N	N	I	S	R
Template Known Secondary structure					T	T	S	S								S	S	S															S
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D