Job Description Q9Z0R4 Confidence 100.00% Date Tue Jul 30 13:06:10 BST 2013 Rank 20 Aligned Residues 287 % Identity 23% Template c4h6yA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ferm, rhogef and pleckstrin domain-containing protein 1; PDBTitle: crystal strucure of the dh-ph-ph domain of farp1 Resolution 4.09 Å Model Dimensions (Å) X:71.687 Y:69.507 Z:48.342

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		1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	Q	G	Y	I	H	E	L	I	V	T	E	E	N	Y	V	N	D	L	Q	L	V	T	E	I	F	Q	K	P	L	T	E	S	E	L	L	T	E	K	E	V	A	M	I	F	V	N	W	K	E	L	I	M	C	N	I	K	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	Y	F	I	A	K	E	V	S	T	T	E	R	T	Y	L	K	D	L	E	V	I	T	S	W	F	Q	S	T	V	S	K	E	D	A	M	P	E	A	L	K	S	L	I	F	P	N	F	E	P	L	H	K	F	H	T	N	F	L
Template Known Secondary structure																																		T	T	T		S									S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.
		1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	L	R	V	R	K	K	M	S	G	E	K	M	P	V	K	M	I	G	D	I	L	S	A	Q	L	P	H	M	Q	P	Y	I	R	F	C	S	C	Q	L	N	G	A	A	L	I	Q	Q	K	T	D	E	A	P	D	F	K	E	F
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.
Template Sequence		K	E	I	E	Q	R	L	A	.	.	.	.	.	.	.	.	L	W	E	G	D	V	M	L	K	N	I	Q	G	M	K	H	L	A	A	H	L	W	K	H	S	E	A	L	E	A	L	E	N	G	I	K	S	S	R	R	L	E	N	F
Template Known Secondary structure										.	.	.	.	.	.	.	.														G	G	G	S					T	T											T	T	T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.
Template SS confidence
		600	.	.	.	.	.	.	.									.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.
		1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	R	L	A	M	D	P	R	C	K	G	M	P	L	S	S	F	I	L	K	P	M	Q	R	V	T	R	Y	P	L	I	I	K	N	I	L	E	N	T	P	E	N	H	P	D	H	S	H	L	K	H	A	L	E	K	A	E	E	L
Query Conservation
Alig confidence													.																																				.	.	.	.	.	.
Template Conservation													.																																				.	.	.	.	.	.
Template Sequence		C	R	D	F	E	L	Q	K	V	C	Y	.	L	P	L	N	T	F	L	L	R	P	L	H	R	L	M	H	Y	K	Q	V	L	E	R	L	C	K	H	H	P	R	D	C	R	A	A	.	.	.	.	.	.	L	A	E	I	T	E	M
Template Known Secondary structure							T	S	S	S			.	S		G	G	G	G	G	T																												.	.	.	.	.	.
Template Predicted Secondary structure													.																																				.	.	.	.	.	.
Template SS confidence
		665	.	.	.	.	670	.	.	.	.	.		.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710							.	.	.	.	.	.	.
		1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.			.	.
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		C	S	Q	V	N	E	G	V	R	E	K	E	N	S	D	R	L	E	W	I	Q	A	H	V	Q	C	E	G	L	S	E	Q	L	V	F	N	S	V	T	N	C	L	G	P	R	K	F	L	H	S	G	K	L	Y	K	A	.	.	K	S
Query Conservation																																																										.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	Q	L	H	G	T	M	I	K	M	E	N	F	Q	K	L	H	E	L	K	K	D	L	I	G	I	D	L	.	.	.	.	.	.	.	.	.	.	.	V	V	P	G	R	E	F	I	R	L	G	S	L	S	K	L	S	G	K	G
Template Known Secondary structure					T	T	T													T	G	G	G	T			S				.	.	.	.	.	.	.	.	.	.	.			T	T														S	S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		724	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.												.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.
		1468	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	E	L	Y	G	F	L	F	N	D	F	L	L	L	T	Q	I	T	K	P	L	G	S	S	G	T	D	K	V	F	S	P	K	S	N	L	Q	Y	K	M	Y	K	T	P	I	F	L	N	E	V	L	V	K	L	P	T	D	P	S
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	Q	R	M	F	F	L	F	N	D	V	L	L	Y	T	S	R	S	N	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	V	H	G	Q	L	P	L	Y	G	M	T	I	E	E	S	E	D	P	H
Template Known Secondary structure											S	S										S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		774	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.																			.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.
		1528	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	E	P	I	F	H	I	S	H	I	D	R	V	Y	T	L	R	A	E	S	I	N	E	R	T	A	W	V	Q	K	I	K	A	A	S	E
Query Conservation
Alig confidence			.	.	.	.
Template Conservation			.	.	.	.
Template Sequence		C	.	.	.	.	L	T	L	R	G	Q	R	Q	S	I	I	V	A	A	S	S	R	S	E	M	E	K	W	V	E	D	I	Q	M	A	I	D
Template Known Secondary structure			.	.	.	.						S	S								S	S	S	T	T
Template Predicted Secondary structure			.	.	.	.
Template SS confidence
		824					.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D