Job Description Q9Z0R4 Confidence 100.00% Date Tue Jul 30 13:06:10 BST 2013 Rank 3 Aligned Residues 354 % Identity 26% Template c3odoA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rho guanine nucleotide exchange factor 1; PDBTitle: crystal structure of the dh/ph domains of p115-rhogef Resolution 2.90 Å Model Dimensions (Å) X:67.848 Y:91.269 Z:54.925

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		1207	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	D	P	S	Q	Q	W	C	S	D	L	H	L	L	D	M	L	T	P	T	E	R	K	R	Q	G	Y	I	H	E	L	I	V	T	E	E	N	Y	V	N	D	L	Q	L	V	T	E	I	F	Q	K	P	L	T	E	S	E	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	P	P	G	W	R	E	L	V	P	P	D	T	L	H	S	L	P	K	S	Q	V	K	R	Q	E	V	I	S	E	L	L	V	T	E	A	A	H	V	R	M	L	R	V	L	H	D	L	F	F	Q	P	M	A	E	C	L	F	F
Template Known Secondary structure			S				S	T	T	T	S						T	T	S																																T								T	S	S
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
		1267	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.							.	1320
Predicted Secondary structure																																																						.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.
Query Sequence		T	E	K	E	V	A	M	I	F	V	N	W	K	E	L	I	M	C	N	I	K	L	L	K	A	L	R	V	R	K	K	M	S	G	E	K	M	P	V	K	M	I	G	D	I	L	S	A	Q	L	P	H	.	.	.	.	.	.	M	Q
Query Conservation																																																						.	.	.	.	.	.
Alig confidence																																		.	.																			.	.	.	.	.	.
Template Conservation																																		.	.
Template Sequence		P	L	E	E	L	Q	N	I	F	P	S	L	D	E	L	I	E	V	H	S	L	F	L	D	R	L	M	K	R	R	Q	E	.	.	S	G	Y	L	I	E	E	I	G	D	V	L	L	A	R	F	D	G	A	E	G	S	W	F	Q	K
Template Known Secondary structure										S	T	T																						.	.	S		S														S
Template Predicted Secondary structure																																		.	.
Template SS confidence
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.			.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
		1321	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	I	R	F	C	S	C	Q	L	N	G	A	A	L	I	Q	Q	K	T	D	E	A	P	D	F	K	E	F	V	K	R	L	A	M	D	P	R	C	K	G	M	P	L	S	S	F	I	L	K	P	M	Q	R	V	T	R	Y	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	S	R	F	C	S	R	Q	S	F	A	L	E	Q	L	K	A	K	Q	R	K	D	P	R	F	C	A	F	V	Q	E	A	E	S	R	P	R	C	R	R	L	Q	L	K	D	M	I	P	T	E	M	Q	R	L	T	K	Y	P	L
Template Known Secondary structure									T													T	T													T	S	G	G	G	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
		1381	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		I	I	K	N	I	L	E	N	T	P	E	N	H	P	D	H	S	H	L	K	H	A	L	E	K	A	E	E	L	C	S	Q	V	N	E	G	V	R	E	K	E	N	S	D	R	L	E	W	I	Q	A	H	V	Q	C	E	G	.	.	.
Query Conservation																																																											.	.	.
Alig confidence											.																																																.	.	.
Template Conservation											.
Template Sequence		L	L	Q	S	I	G	Q	N	T	.	E	E	P	T	E	R	E	K	V	E	L	A	A	E	C	C	R	E	I	L	H	H	V	N	Q	A	V	R	D	M	E	D	L	L	R	L	K	D	Y	Q	R	R	L	D	L	S	H	L	R	Q
Template Known Secondary structure									T		.		S																																																T
Template Predicted Secondary structure											.
Template SS confidence
		571	.	.	.	.	.	.	.	.		580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.
		1438	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.				1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		L	S	E	Q	L	V	F	N	S	V	T	N	C	L	G	P	R	K	F	L	H	S	G	K	L	Y	K	A	K	S	N	K	.	.	.	E	L	Y	G	F	L	F	N	D	F	L	L	L	T	Q	I	T	K	P	L	G	S	S	G	T
Query Conservation																																		.	.	.
Alig confidence																																		.	.	.
Template Conservation
Template Sequence		S	S	D	P	M	L	S	E	F	K	N	L	D	I	T	K	K	K	L	V	H	E	G	P	L	T	W	R	V	T	K	D	K	A	V	E	V	H	V	L	L	L	D	D	L	L	L	L	L	Q	R	Q	D	E	R	L	L	L	K	S
Template Known Secondary structure					G	G	G	S	S		S	S			T	T	S	S												S	S	S	S											S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.
		1495	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.		.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		D	K	V	F	S	P	K	S	N	L	Q	Y	K	M	Y	K	T	P	I	F	L	N	E	V	L	V	K	.	L	P	T	D	P	S	G	D	E	P	I	F	H	I	S	H	I	D	R	V	Y	T	L	R	A	E	S	I	N	E	R	T
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		H	S	R	T	L	T	P	T	P	D	G	K	T	M	L	R	P	V	L	R	L	T	S	A	M	T	R	E	V	A	T	D	H	K	A	F	Y	V	L	F	T	W	D	Q	E	A	Q	I	Y	E	L	V	A	Q	T	V	S	E	R	K
Template Known Secondary structure		B		S		S	S	S	S				S			B		S				S	T	T							S	S	S	T	T									S	S										S	S
Template Predicted Secondary structure
Template SS confidence
		690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.
		1554	.	.	.	.	.	1560	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	W	V	Q	K	I	K	A	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	W	C	A	L	I	T	E	T	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		750	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D