Job Description Q9Z0R4 Confidence 99.07% Date Tue Jul 30 13:06:10 BST 2013 Rank 64 Aligned Residues 105 % Identity 25% Template c3nsjA_ PDB info PDB header:immune system Chain: A: PDB Molecule:perforin-1; PDBTitle: the x-ray crystal structure of lymphocyte perforin Resolution 2.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1587	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	G	R	L	M	V	N	V	V	E	G	I	E	L	K	P	C	R	S	H	G	K	S	N	P	Y	C	E	V	T	M	G	S	Q	C	H	I	T	K	T	I	Q	D	T	L	N	P	K	W	N	S	N	C	Q	F	F	I	R	D
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		G	L	A	H	L	V	V	S	N	F	R	A	E	H	L	W	G	.	D	Y	T	T	A	T	D	A	Y	L	K	V	F	F	G	G	Q	E	F	R	T	G	V	V	W	N	N	N	N	P	R	W	T	D	K	M	D	F	E	N	V	L
Template Known Secondary structure		T													S				.	S	S		S											T	T								B		S		S	S		B
Template Predicted Secondary structure																			.
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.		.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
		1647	.	.		1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.									.	.
Predicted Secondary structure					.																																															.	.	.	.	.	.	.	.
Query SS confidence					.																																															.	.	.	.	.	.	.	.
Query Sequence		L	E	Q	.	E	V	L	C	I	T	V	F	E	R	D	Q	F	S	P	D	D	F	L	G	R	T	E	I	R	V	A	D	I	K	K	D	Q	G	S	K	G	P	V	T	K	C	L	L	L	H	.	.	.	.	.	.	.	.	E	V
Query Conservation					.																																															.	.	.	.	.	.	.	.
Alig confidence					.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	T	G	G	P	L	R	V	Q	V	W	D	A	D	Y	G	W	D	D	D	L	L	G	S	C	D	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	S	G	F	H	E	V	T	C	E	L
Template Known Secondary structure		T	T	T													S	S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.																				500	.	.	.	.	.	.	.	.	.	510	.
		1698	.	1700	.	.	.	.	.	.	.	.	.	1710	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	G	E	I	V	V	R	L	D	L	Q	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	H	G	R	V	K	F	S	Y	H	A	K	C	L
Template Known Secondary structure		S	S	S
Template Predicted Secondary structure
Template SS confidence
		512	.	.	.	.	.	.	.	520	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D