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Job DescriptionQ9Z0R4
Confidence97.60%DateTue Jul 30 13:06:10 BST 2013
Rank340Aligned Residues132
% Identity15%Templatec3mseB_
PDB info PDB header:transferaseChain: B: PDB Molecule:calcium-dependent protein kinase, putative; PDBTitle: crystal structure of c-terminal domain of pf110239.
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30...... ...40.........50.........60.........70.....
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Query Sequence  ITVEERAKHDQQFLSLKPIA. GFITGDQARNFFFQSGLPQPVLAQIWALADMNNDGRMDQ
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Template Sequence  VINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIKKWDINRILQALDINDRGNITY
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   32.......40.........50.........60.........70.........80.........90.
 
   76...80.........90.........100.........110.........120.........130.....
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Query Sequence  VEFSIAMKLIKLKLQGYQLPSTLPPVMKQQPVAISSAPAFGIGGIASMPPLTAVAPVPMG
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Template Sequence  TEFMAGC. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   92......
 
   136...140.........150.........160.........170.........180.........190.....
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Query Sequence  SIPVVGMSPPLVSSVPPAAVPPLANGAPPVIQPLPAFAHPAATWPKSSSFSRSGPGSQLN
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   196...200.........210.........220.........230.........240.........250.....
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Query Sequence  TKLQKAQSFDVASAPPAAEWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLP
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . YRWKNITFLKAAFNKIDKDEDGYISKSDIVSLVHDKVLD
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   99100.........110.........120.........130.......
 
   256...260.........270.........280...
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Query Sequence  QAQLASIWNLSDIDQDGKLTAEEFILAM
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Template Sequence  NNDIDNFFLSVH. SIINKISFQEFKDYM
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B
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   140.........150. ........160......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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