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Job DescriptionQ9Z0R4
Confidence97.99%DateTue Jul 30 13:06:10 BST 2013
Rank323Aligned Residues137
% Identity27%Templatec3evrA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:myosin light chain kinase, green fluorescent PDBTitle: crystal structure of calcium bound monomeric gcamp2
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30...... ...40.........50..... ....60.........70...
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Query Sequence  ITVEERAKHDQQFLSLKPIA. GFITGDQARNFFFQSGLPQ. . PVLAQIWALADMNNDGRM
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Template Sequence  LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI
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   307..310.........320.........330.........340.........350.........360......
 
   74.....80.........90.........100.........110.........120.........130...
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Query Sequence  DQVEFSIAMKLIKLKLQGYQLPSTLPPVMKQQPVAISSAPAFGIGGIASMPPLTAVAPVP
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Template Sequence  DFPEFLTMMARKMK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   367..370.........380
 
   134.....140.........150.........160.........170.........180.........190...
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Query Sequence  MGSIPVVGMSPPLVSSVPPAAVPPLANGAPPVIQPLPAFAHPAATWPKSSSFSRSGPGSQ
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   194.....200.........210.........220.........230.........240.........250...
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Query Sequence  LNTKLQKAQSFDVASAPPAAEWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQSS
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG
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   381........390.........400.........410......
 
   254.....260.........270.........280...
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Query Sequence  . . LPQAQLASIWNLSDIDQDGKLTAEEFILAM
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Template Sequence  EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM
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   417..420.........430.........440........
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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