Job Description Q9Z0R4 Confidence 99.94% Date Tue Jul 30 13:06:10 BST 2013 Rank 32 Aligned Residues 187 % Identity 32% Template c3eo2A_ PDB info PDB header:splicing Chain: A: PDB Molecule:neuroepithelial cell-transforming gene 1 protein; PDBTitle: crystal structure of the rhogef domain of human neuroepithelial cell-2 transforming gene 1 protein Resolution 2.60 Å

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		1224	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	P	T	E	R	K	R	Q	G	Y	I	H	E	L	I	V	T	E	E	N	Y	V	N	D	L	Q	L	V	T	E	I	F	Q	K	P	L	T	E	S	E	L	L	T	E	K	E	V	A	M	I	F	V	N	W	K	E	L	I	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	T	R	E	I	R	R	Q	E	A	I	Y	E	M	S	R	G	E	Q	D	L	I	E	D	L	K	L	A	R	K	A	Y	H	D	P	M	L	K	L	S	I	M	S	E	E	E	L	T	H	I	F	G	D	L	D	S	Y	I	P
Template Known Secondary structure																																		T								T	S	S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		1284	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	N	I	K	L	L	K	A	L	R	V	R	K	K	M	S	G	E	K	M	P	V	K	M	I	G	D	I	L	S	A	Q	L	P	H	M	Q	P	Y	I	R	F	C	S	C	Q	L	N	G	A	A	L	I	Q	Q	K	T	D	E	A
Query Conservation
Alig confidence																.	.	.																																							.
Template Conservation																.	.	.																																							.
Template Sequence		L	H	E	D	L	L	T	R	I	G	E	A	T	K	.	.	.	P	D	G	T	V	E	Q	I	G	H	I	L	V	S	W	L	P	R	L	N	A	Y	R	G	Y	C	S	N	Q	L	A	A	K	A	L	L	D	Q	.	K	K	Q	D
Template Known Secondary structure														B		.	.	.	T	T	S		B	S										G	G	G	G	G	G	G					T	T											.		T	T
Template Predicted Secondary structure																.	.	.																																							.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.
		1344	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	F	K	E	F	V	K	R	L	A	M	D	P	R	C	K	G	M	P	L	S	S	F	I	L	K	P	M	Q	R	V	T	R	Y	P	L	I	I	K	N	I	L	E	N	T	P	E	N	H	P	D	H	S	H	L	K	H	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	R	V	Q	D	F	L	Q	R	C	L	E	S	P	F	S	R	K	L	D	L	W	S	F	L	D	I	P	R	S	R	L	V	K	Y	P	L	L	L	K	E	I	L	K	H	T	P	K	E	H	P	D	V	Q	L	L	E	D	A	I
Template Known Secondary structure														S	T	T						G	G	G	T	T																				T	S		T	T
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		1404	.	.	.	.	.	1410	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	A	E	E	L	C	S	Q	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	I	Q	G	V	L	S	D	I	N
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D