Job Description Q9Z0R4 Confidence 96.80% Date Tue Jul 30 13:06:10 BST 2013 Rank 437 Aligned Residues 259 % Identity 14% Template c2oevA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:programmed cell death 6-interacting protein; PDBTitle: crystal structure of alix/aip1 Resolution 3.30 Å

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		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	K	R	E	N	F	E	R	G	S	V	E	L	E	K	R	R	Q	A	L	L	E	Q	Q	R	K	E	Q	E	R	L	A	Q	L	E	R	A	E	Q	E	R	K	E	R	E	R	Q	E	Q	E	A	K	R	Q	L	E	L	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	T	V	D	Q	L	I	K	E	L	P	E	L	L	Q	R	N	R	E	I	L	D	E	S	L	R	L	L	D	E	E	E	A	T	D	N	D	L	R	A	K	F	K	E	R	W	Q	R	T	P	S	N	E	L	Y	K	P	L	R	A
Template Known Secondary structure																																									T	T	S	S	S	S			S							S	S
Template Predicted Secondary structure
Template SS confidence
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.						.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.
Query SS confidence																																													.	.	.	.	.
Query Sequence		Q	L	E	K	Q	R	E	L	E	R	Q	R	E	E	E	R	R	K	E	I	E	R	R	E	A	A	K	R	E	L	E	R	Q	R	Q	L	E	W	E	R	N	R	R	.	.	.	.	.	Q	E	L	L	N	Q	R	N	K	E	Q	E
Query Conservation																																													.	.	.	.	.
Alig confidence																																													.	.	.	.	.
Template Conservation
Template Sequence		E	G	T	N	F	R	T	V	L	D	K	A	V	Q	A	D	G	Q	V	K	E	C	Y	Q	S	H	R	D	T	I	V	L	L	C	K	P	E	P	E	L	N	A	A	I	P	S	A	N	P	A	K	T	M	Q	G	S	E	V	V	N
Template Known Secondary structure																										T	T								T	S									S							S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	V	V	L	K	A	R	R	K	T	L	E	F	E	L	E	A	L	N	D	K	K	H	Q	L	E	G	K	L	Q	D	I	R	C	R	L	A	T	Q	R	Q	E	I	E	S	T	N	K	S	R	E	L	R	I	A	E	I	T	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	K	S	L	L	S	N	L	D	E	V	K	K	E	R	E	G	L	E	N	D	L	K	S	V	N	F	D	M	T	S	K	F	L	T	A	L	A	Q	D	G	V	I	N	E	E	A	L	S	V	T	E	L	D	R	V	Y	G	G
Template Known Secondary structure																																										S	S	S															T
Template Predicted Secondary structure
Template SS confidence
		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	Q	Q	L	Q	E	S	Q	Q	M	L	G	R	L	I	P	E	K	Q	I	L	S	D	Q	L	K	Q	V	Q	Q	N	S	L	H	R	D	S	L	L	T	L	K	R	A	L	E	A	K	E	L	A	R	Q	Q	L	R	E	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	T	K	V	Q	E	S	L	K	K	Q	E	G	L	L	K	N	I	Q	V	S	H	Q	E	F	S	K	M	K	Q	S	N	N	E	A	N	L	R	E	E	V	L	K	N	L	A	T	A	Y	D	N	F	V	E	L	V	A	N	L
Template Known Secondary structure																															S			S	S
Template Predicted Secondary structure
Template SS confidence
		611	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670
		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	V	E	R	E	T	R	S	K	L	Q	E	I	D	V	F	N	N	Q	L	K	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	G	T	K	F	Y	N	E	L	T	E	I	L	V	R	F	Q	N	K	C	S	D	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		671	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D