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Job DescriptionQ9Z0R4
Confidence96.70%DateTue Jul 30 13:06:10 BST 2013
Rank451Aligned Residues141
% Identity23%Templatec2lhiA_
PDB info PDB header:metal binding proteinChain: A: PDB Molecule:calmodulin, serine/threonine-protein phosphatase 2b PDBTitle: solution structure of ca2+/cna1 peptide-bound ycam
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30...... ...40.........50..... ....60......
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Query Sequence  GSLDVWAITVEERAKHDQQFLSLKPIA. GFITGDQARNFFFQSGLPQ. . PVLAQIWALAD
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Template Sequence  GSSN. . . LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEID
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TTGGGTT
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   0... ......10.........20.........30.........40.........50......
 
   67..70.........80.........90.........100.........110.........120......
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Query Sequence  MNNDGRMDQVEFSIAMKLIKLKLQGYQLPSTLPPVMKQQPVAISSAPAFGIGGIASMPPL
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Template Sequence  VDGNHQIEFSEFLALMSRQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  SS
SSSB
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   57..60.........70.....
 
   127..130.........140.........150.........160.........170.........180......
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Query Sequence  TAVAPVPMGSIPVVGMSPPLVSSVPPAAVPPLANGAPPVIQPLPAFAHPAATWPKSSSFS
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   187..190.........200.........210.........220.........230.........240......
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Query Sequence  RSGPGSQLNTKLQKAQSFDVASAPPAAEWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQAR
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LKSNDSEQELLEAFKVFDKNGDGLISAAELK
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   76...80.........90.........100......
 
   247..250... ......260.........270.........280....
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Query Sequence  TILMQSS. . LPQAQLASIWNLSDIDQDGKLTAEEFILAMH
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Template Sequence  HVLTSIGEKLTDAEVDDMLREVS. DGSGEINIQQFAALLS
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.TTSS
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   107..110.........120......... 130.........140.....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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