Job Description Q9Z0R4 Confidence 100.00% Date Tue Jul 30 13:06:10 BST 2013 Rank 11 Aligned Residues 338 % Identity 20% Template c2dfkA_ PDB info PDB header:cell cycle Chain: A: PDB Molecule:collybistin ii; PDBTitle: crystal structure of the cdc42-collybistin ii complex Resolution 2.15 Å Model Dimensions (Å) X:78.053 Y:83.680 Z:57.514

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		1222	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.		.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		D	M	L	T	P	T	E	R	K	R	Q	G	Y	I	H	E	L	I	V	T	E	E	N	Y	V	N	D	L	Q	L	V	T	E	I	F	Q	K	P	L	T	E	S	E	.	L	L	T	E	K	E	V	A	M	I	F	V	N	W	K	E
Query Conservation																																													.
Alig confidence																																													.
Template Conservation
Template Sequence		R	P	L	Q	N	R	D	Q	M	R	A	N	V	I	N	E	I	M	S	T	E	R	H	Y	I	K	H	L	K	D	I	C	E	G	Y	L	K	Q	C	R	K	R	R	D	M	F	S	D	E	Q	L	K	V	I	F	G	N	I	E	D
Template Known Secondary structure																																				T								T	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		1281	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	M	C	N	I	K	L	L	K	A	L	R	V	R	K	K	M	S	G	E	K	M	P	V	K	M	I	G	D	I	L	S	A	Q	L	P	H	M	Q	P	Y	I	R	F	C	S	C	Q	L	N	G	A	A	L	I	Q	Q	K	T
Query Conservation
Alig confidence																				.	.
Template Conservation																				.	.
Template Sequence		I	Y	R	F	Q	M	G	F	V	R	D	L	E	K	Q	Y	N	N	.	.	D	D	P	H	L	S	E	I	G	P	C	F	L	E	H	Q	D	G	F	W	I	Y	S	E	Y	C	N	N	H	L	D	A	C	M	E	L	S	K	L	M
Template Known Secondary structure																			S	.	.	S		G	G	G										T	T	T	G	G	G																				T
Template Predicted Secondary structure																				.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.			120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		1341	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	A	P	D	F	K	E	F	V	K	R	L	A	M	D	P	R	C	K	G	M	P	L	S	S	F	I	L	K	P	M	Q	R	V	T	R	Y	P	L	I	I	K	N	I	L	E	N	T	P	E	N	H	P	D	H	S	H	L	K
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		K	.	D	S	R	Y	Q	H	F	F	E	A	C	R	L	L	Q	Q	M	I	D	I	A	I	D	G	F	L	L	T	P	V	Q	K	I	C	K	Y	P	L	Q	L	A	E	L	L	K	Y	T	A	Q	D	H	S	D	Y	R	Y	V	A
Template Known Secondary structure		T	.	S														T	T			S								T																			T	S		T	T	S	T	T
Template Predicted Secondary structure			.
Template SS confidence
		160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		1401	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	L	E	K	A	E	E	L	C	S	Q	V	N	E	G	V	R	E	K	E	N	S	D	R	L	E	W	I	Q	A	H	V	Q	C	E	G	L	S	E	Q	L	V	F	N	S	V	T	N	C	L	G	P	R	K	F	L	H	S	G
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.
Template Sequence		A	A	L	A	V	M	R	N	V	T	Q	Q	I	N	E	R	K	R	R	L	E	N	I	D	K	I	A	Q	W	Q	A	S	V	.	.	.	.	.	.	.	.	L	D	W	E	G	D	D	I	L	D	R	S	S	E	L	I	Y	T	G
Template Known Secondary structure																							T											S	.	.	.	.	.	.	.	.	B	T			S	S		G	G	G	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.									.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		1461	.	.	.	.	.	.	.					.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		K	L	Y	K	A	K	S	N	.	.	.	.	K	E	L	Y	G	F	L	F	N	D	F	L	L	L	T	Q	I	T	K	P	L	G	S	S	G	T	D	K	V	F	S	P	K	S	N	L	Q	Y	K	M	Y	K	T	P	I	F	L	N
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	M	A	W	I	Y	Q	P	Y	G	R	N	Q	Q	R	V	F	F	L	F	D	H	Q	M	V	L	C	K	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	R	R	D	I	L	Y	Y	K	G	R	I	D	M	D
Template Known Secondary structure							S	S	T	T												T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S		T	T										G	G
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300															.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		1517	.	.	1520	.	.	.	.	.	.	.							.	.	1530	.	.	.	.	.	.			.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.										.	.
Query SS confidence													.	.	.	.	.	.										.	.
Query Sequence		E	V	L	V	K	L	P	T	D	P	S	.	.	.	.	.	.	G	D	E	P	I	F	H	I	S	.	.	H	I	D	R	V	Y	T	L	R	A	E	S	I	N	E	R	T	A	W	V	Q	K	I	K	A	A	S	E	L	Y	I	E
Query Conservation													.	.	.	.	.	.										.	.
Alig confidence													.	.	.	.	.	.										.	.
Template Conservation
Template Sequence		K	Y	E	V	I	D	I	E	D	G	R	D	D	D	F	N	V	S	M	K	N	A	F	K	L	H	N	K	E	T	E	E	V	H	L	F	F	A	K	K	L	E	E	K	I	R	W	L	R	A	F	R	E	E	R	K	M	V	Q	E
Template Known Secondary structure		G								S				S	S	S					S	S							S	S	S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
		1569	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	K	K	K	R	E	K	A	Y	L	V	R	S	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	K	I	G	F	E	I	S	E	N	Q	K	R	Q	A
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D