 |
| Job Description | Q9Z0R4 | | Confidence | 96.90% | Date | Tue Jul 30 13:06:10 BST 2013 |
| Rank | 422 | Aligned Residues | 64 |
| % Identity | 11% | Template | c2d58A_ |
| PDB info |
PDB header:metal binding protein | Chain: A: PDB Molecule:allograft inflammatory factor 1; |
PDBTitle: human microglia-specific protein iba1
|
| Resolution | 1.90 Å |
|
 |
|   |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
V | E | E | R | A | K | H | D | Q | Q | F | L | S | L | K | P | I | A | . |
G | F | I | T | G | D | Q | A | R | N | F | F | F | Q | S | G | L | P | Q | . |
. |
P | V | L | A | Q | I | W | A | L | A | D | M | N | N | D | G | R | M | D | Q |
| Query Conservation |   |
  |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   | . |
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |
|
|   | . | . |   |   |
|   |   |
|
|   |
|
|
|   |   |   |   |
|   |
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |
|   |   |
|   |
|   |   |   |
|
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |
|
|   |
|   |
|
| Template Sequence |   |
P | S | K | L | E | G | F | K | E | K | Y | M | E | F | D | L | N | G | N | G | D | I | D | I | M | S | L | K | R | M | L | E | K | L | G | V | P | K | T | H | L | E | L | K | K | L | I | G | E | V | S | S | G | S | G | E | T | F | S | Y |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| S | S | S | S | S |  |  |
|  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
44 | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
|   |
|   |   |
76 | . | . | . | 80 | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
| Query Sequence |   |
V | E | F | S | I | A | M |
| Query Conservation |   |
  |
|
|   |   |
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|
|   |   |   |
|
| Template Sequence |   |
P | D | F | L | R | M | M |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|   |   |
104 | . | . | . | . | . | 110 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|