Job Description A2A699 Confidence 21.32% Date Wed Jul 10 14:20:28 BST 2013 Rank 107 Aligned Residues 54 % Identity 17% Template c1nt9G_ PDB info PDB header:transcription, transferase Chain: G: PDB Molecule:dna-directed rna polymerase ii 19 kd polypeptide; PDBTitle: complete 12-subunit rna polymerase ii Resolution 4.20 Å

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		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	L	L	T	G	N	G	T	E	V	P	L	S	G	P	I	H	L	S	L	P	V	P	S	E	P	R	A	L	A	V	G	T	S	I	P	A	W	R	F	D	P	K	S	G	L	W	V	R	N	G	T	G	V	I	R	K	E	G
Query Conservation
Alig confidence															.																.	.	.	.	.	.	.	.	.
Template Conservation															.																.	.	.	.	.	.	.	.	.
Template Sequence		V	V	S	C	S	Q	H	G	F	E	V	Q	V	.	G	P	M	K	V	F	V	T	K	H	L	M	P	Q	D	.	.	.	.	.	.	.	.	.	L	T	F	N	A	G	S	N	P	P	S	Y	Q	S	S	E	D	V	I	T	I	K
Template Known Secondary structure							T	T							.	S	S	S						T	T	T	S	S	S	S	.	.	.	.	.	.	.	.	.				B	T	T					S	S	S						S	S
Template Predicted Secondary structure															.																.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.										.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		275	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	I	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D