Job Description O54836 Confidence 54.30% Date Wed Jul 10 14:35:54 BST 2013 Rank 224 Aligned Residues 89 % Identity 8% Template c4jcjB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:fusion protein insulin gene enhancer protein isl-1, lim PDBTitle: crystal structure of isl1 lim domains with ldb1 lim-interaction domain Resolution 3.00 Å

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		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	C	K	L	C	N	V	T	L	N	S	A	Q	Q	A	Q	A	H	Y	Q	G	K	N	H	G	K	K	L	R	N	Y	Y	A	A	N	S	C	P	P	P	A	R	V	S	S	V	V	A	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	C	V	G	C	G	N	Q	I	H	D	Q	Y	I	L	R	V	S	P	D	L	E	W	H	A	A	C	L	K	C	A	E	C	N	Q	Y	L	D	E	S	C	T	C	F	V	R	D	G	K	T	Y	C	K	R	D	Y	I	R	L	Y
Template Known Secondary structure		B		T	T	T		S	B			S	S						T	T	T					G	G	G		B		T	T	T			B	S	T	T	S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	V	A	T	P	L	V	P	V	P	P	Q	V	G	S	C	K	P	G	G	R	V	I	L	A	T	E	N	D	Y	C	K	L	C	D	A	S	F	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	K	C	A	K	C	S	I	G	F	S	K	N	D	F	V	M	R	A	R	S	K	V	Y	H	I	E	C	F	R	C	V	A	C	S	R	Q	L	I	P
Template Known Secondary structure		S		B		T	T	T			B			S	S	S						T	T					S	T	T		B		T	T	T			B			T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D