Job Description O54836 Confidence 99.37% Date Wed Jul 10 14:35:54 BST 2013 Rank 1 Aligned Residues 188 % Identity 11% Template c4ijdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:histone-lysine n-methyltransferase prdm9; PDBTitle: crystal structure of methyltransferase domain of human pr domain-2 containing protein 9 Resolution 2.15 Å Model Dimensions (Å) X:50.259 Y:52.602 Z:35.496

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	L	C	K	P	L	F	C	K	L	C	N	V	T	L	N	S	A	Q	Q	A	Q	A	H	Y	Q	G	K	N	H	G	K	K	L	R	N	Y	Y	A	A	N	S	C	P	P	P	A	R	V	S	S	V	V	A	E	P	V	A	T
Query Conservation
Alig confidence																													.
Template Conservation																													.
Template Sequence		P	Q	D	D	D	Y	L	Y	C	E	X	C	Q	N	F	F	I	D	S	C	A	A	H	G	P	P	T	.	F	V	K	D	S	A	V	D	K	G	H	P	N	R	S	A	L	S	L	P	P	G	L	R	I	G	P	S	G	I	P	Q
Template Known Secondary structure				G	G	G					T	T	T	T				S	S	S	B	T	T	T	B				.									T	T		T	T					T			T	T							S	S	T	T
Template Predicted Secondary structure																													.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.																								.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	V	P	V	P	P	Q	V	G	S	C	K	P	G	G	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	A	T	E	N	D	Y	C	K	L	C	D	A	S	F	S	S	P
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	L	G	V	W	N	E	A	S	D	L	P	L	G	L	H	F	G	P	Y	E	G	R	I	T	E	D	E	E	A	A	N	N	G	Y	S	W	L	I	T	K	G	R	N	C	Y	E	Y	V	D	G	K	D	K	S	W	A	N	W
Template Known Secondary structure										S	S		B		T	T								S						G	G	G	T	T	S	S	S								T	T									S	T	T	T	S		G
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	A	Q	A	H	Y	Q	G	K	N	H	A	K	R	L	R	L	A	E	A	Q	S	H	S	F	S	D	S	A	E	A	G	Q	R	R	T	R	K	E	G	S	E	F	K	M	V	A	T	R	R	N	M	N	P	V	Q	S	N	S
Query Conservation
Alig confidence												.	.	.
Template Conservation												.	.	.
Template Sequence		X	R	Y	V	N	C	A	R	D	D	.	.	.	E	E	Q	N	L	V	A	F	Q	Y	H	R	Q	I	F	Y	R	T	C	R	V	I	R	P	G	C	E	L	L	V	W	Y	G	D	E	Y	G	Q	E	L	G	I	K	W	G	S	K
Template Known Secondary structure		G	G	G					S	S	T	.	.	.	T	T									T	T							S	S		B		T	T		B							T	T	S							T	T	T	S
Template Predicted Secondary structure												.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.				.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		G	P	Y	F	N	A	R	S	R	Q	R	I	P	R	D	L	A	M	C	V	T	P	S	G	Q	F	Y	C	S	M	C	N	V	G	A	G	E	E	V	E	F	R	Q	H	L	E	S	K	Q	H
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template Sequence		W	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	E	L	X	P	K	P	E	I	H	P	C	P	S	C	C	L	A	F	S	S	Q	K	F	L	S	Q	H	V	E	.	R	N	H
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.													S	S	S	S				S	S										.			T
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.
Template SS confidence
		373	.															.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.		.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D