Job Description O54836 Confidence 99.02% Date Wed Jul 10 14:35:54 BST 2013 Rank 8 Aligned Residues 153 % Identity 14% Template c2rpcA_ PDB info PDB header:transcription Chain: A: PDB Molecule:zinc finger protein zic 3; PDBTitle: solution structure of the tandem zf-c2h2 domains from the2 human zinc finger protein zic 3 Resolution UNK Model Dimensions (Å) X:56.420 Y:74.351 Z:32.259

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		L	P	L	A	G	E	E	D	L	A	K	R	G	E	P	D	S	A	L	E	E	L	C	K	P	L	F	C	K	L	C	N	V	T	L	N	S	A	Q	Q	A	Q	A	H	Y	Q	G	.	K	N	H	G	K	K	L	R	N	Y	Y	A
Query Conservation																																																	.
Alig confidence																																																	.
Template Conservation
Template Sequence		G	S	S	G	S	S	G	Q	P	I	K	Q	E	L	S	C	K	W	I	D	E	A	Q	L	S	R	P	K	K	S	C	D	R	T	F	S	T	M	H	E	L	V	T	H	V	T	M	E	H	V	G	G	P	E	Q	N	N	H	V	C
Template Known Secondary structure								S							B				B			T	T			S	S	S								B	S	S										T	T	T	S			T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	S	C	P	P	P	A	R	V	S	S	V	V	A	E	P	V	A	T	P	L	V	P	V	P	P	Q	V	G	S	C	K	P	G	G	R	V	I	L	A	T	E	N	D	Y	C	K	L	C	D	A	S	F	S	S	P	A	V	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	W	E	E	C	P	R	E	G	K	S	F	K	A	K	Y	K	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B	T	T		T	T	S	S				S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																												61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	H	Y	Q	G	K	N	H	A	K	R	L	R	L	A	E	A	Q	S	H	S	F	S	D	S	A	E	A	G	Q	R	R	T	R	K	E	G	S	E	F	K	M	V	A	T	R	R	N	M	N	P	V	Q	S	N	S	G	P	Y
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	N	H	I	R	V	H	T	G	E	K	P	F	P	C	P	F	P	G	C	G	K	I	F	A	R	S	E	N	L	K	I	H	K	R	T	H	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T								S				S		T	T	T					S										T	T	T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	A	R	S	R	Q	R	I	P	R	D	L	A	M	C	V	T	P	S	G	Q	F	Y	C	S	M	C	N	V	G	A	G	E	E	V	E	F	R	Q	H	L	E	S	K	Q	H	K	S	K	V	S	E	Q	R	Y	R	S	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	P	F	K	C	E	F	E	G	C	D	R	R	F	A	N	S	S	D	R	K	K	H	M	H	V	.	.	.	.	.	H	T	S	D	K	S	G	P	S	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S	B			S	S	T	T					B	S	S							S	S	T	T	.	.	.	.	.	T	T	S				S		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template SS confidence
																			118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D