Job Description Q9CX99 Confidence 37.11% Date Tue Jul 30 12:56:35 BST 2013 Rank 328 Aligned Residues 80 % Identity 23% Template c3or8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6 Resolution 1.60 Å

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		R	V	K	P	H	P	W	Y	S	G	R	I	S	R	Q	L	A	E	E	T	L	M	K	R	N	H	L	G	A	F	L	I	R	E	S	E	S	S	P	G	E	F	S	V	S	V	N	Y	G	D	Q	V	.	Q	H	F	K	V	L	R
Query Conservation																																																						.
Alig confidence											.												.																															.
Template Conservation											.												.
Template Sequence		R	V	I	N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	.	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E
Template Known Secondary structure							T	T			.												.	T	T	S		T	T								S	S		T	T										T	T
Template Predicted Secondary structure											.												.
Template SS confidence
		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		113	.								.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.
Query Sequence		E	A	.	.	.	.	.	.	.	S	G	K	Y	F	L	W	E	E	K	F	N	S	L	N	E	L	V	D	F	Y
Query Conservation				.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	K	E	N	P	L	A	L	G	K	V	L	V	V	E	G	Q	R	Y	H	D	L	D	Q	I	I	V	E	Y
Template Known Secondary structure			S		S	S	T	T	S			S					T	T				S	S								T
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D