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Job DescriptionQ9CX99
Confidence96.34%DateTue Jul 30 12:56:35 BST 2013
Rank234Aligned Residues102
% Identity17%Templatec3h41A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:nlp/p60 family protein; PDBTitle: crystal structure of a nlpc/p60 family protein (bce_2878) from2 bacillus cereus atcc 10987 at 1.79 a resolution
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.. .......50.........60.........70..
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Query Sequence  GDTLKILNMEDDQNWYKAELR. . . . . . . . . GAEGFVPKNYIRVKPHPWYSGRISRQLAEE
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Template Sequence  GQEVTVVDKKGD. . WVKVLVHGQPTPRNEEGYPGWXPEKQLTYNQEFADKTNEPFVLVTK
Template Known Secondary structure  T
TT..TT

BTTBSS
GGG

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   8990.........100 .........110.........120.........130.........140......
 
   73......80.........90.........100.........110.........120.........130..
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Query Sequence  TLMKRNHLGAFLIRESESSPGEFSVSVNYGDQVQHFKVLREASGKYFLWEEKFNSLNELV
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Template Sequence  PTA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  S.........................................................
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   147..
 
   133......140.........150.........160.........170.........180.........190..
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Query Sequence  DFYRTTTIAKRRQIFLCDEQPLIKPSRACFAQAQFDFSAQDPSQLSLRRGDIVEVVERED
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ILYINPSEKHKSLEVSYNTRLPLLSEDT
Template Known Secondary structure  ................................SS
TT

TT

S
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   150.........160.........170.......
 
   193......200 .........210.....
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Query Sequence  PHWWRGRA. GGRLGFFPRSYVQPV
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Template Sequence  . ISYRVLLPNGQKAWLRKNDGTFY
Template Known Secondary structure  .S
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   178.180.........190.........200
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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