Return to main results Retrieve Phyre Job Id

Job DescriptionQ9CX99
Confidence99.70%DateTue Jul 30 12:56:35 BST 2013
Rank63Aligned Residues78
% Identity23%Templatec2yt6A_
PDB info PDB header:cell cycleChain: A: PDB Molecule:adult male urinary bladder cdna, riken full- PDBTitle: solution structure of the sh3_1 domain of yamaguchi sarcoma2 viral (v-yes) oncogene homolog 1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150.........160.........170.........180.........190.......
Predicted Secondary structure 









































Query SS confidence 



























































Query Sequence  TTIAKRRQIFLCDEQPLIKPSRACFAQAQFDFSAQDPSQLSLRRGDIVEVVEREDPHWWR
Query Conservation                             


 
 
    



  

 
 

 
   


 
Alig confidence 



























































Template Conservation      
 
     
              

 

 
    


   

 
 

      

 
Template Sequence  SSGASSSFSVVSSSYPTGLTGGVTIFVALYDYEARTTEDLSFKKGERFQIINNTEGDWWE
Template Known Secondary structure 















SS

SS

SS



SSTTS



TT

S
TT
Template Predicted Secondary structure 








































Template SS confidence 



























































   5....10.........20.........30.........40.........50.........60....
 
   198.200 .........210.....
Predicted Secondary structure  ..



Query SS confidence 


. .














Query Sequence  GRA. . GGRLGFFPRSYVQPV
Query Conservation 
  .. 
  
 





  
Alig confidence 


..














Template Conservation        
  
 


 

   
Template Sequence  ARSIATGKSGYIPSNYVVPA
Template Known Secondary structure  SSS


TTTS
Template Predicted Secondary structure 





Template SS confidence 



















   65....70.........80....
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions
Phyre2 is part of Genome3D