Return to main results Retrieve Phyre Job Id

Job DescriptionQ9CX99
Confidence88.41%DateTue Jul 30 12:56:35 BST 2013
Rank276Aligned Residues103
% Identity27%Templatec2lctA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:proto-oncogene vav; PDBTitle: solution structure of the vav1 sh2 domain complexed with a syk-derived2 doubly phosphorylated peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100.........110...
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Query Sequence  RVKPHPWYSGRISRQLAEETLMKRNHLGAFLIRESESSPGEFSVSVNYGDQVQHFKVLRE
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Template Sequence  DLSVHLWYAGPMERAGAESIL. ANRSDGTFLVRQRVKDAAEFAISIKYNVEVKHIKIMTA
Template Known Secondary structure 
STTSSSS

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   665....670.........680..... ....690.........700.........710.........720...
 
   114.....120.........130.........140.........150.......
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Query Sequence  ASGKYFLWEEKFNSLNELVDFYRTTTIAKRRQIFLCDEQPLIKP
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Template Sequence  EGLYRITEKKAFRGLTELVEFYQQNSLKDCFKSLDTTLQFPFKE
Template Known Secondary structure  TTSSSSSSSTTS
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   724.....730.........740.........750.........760.......
 
Download:Text version FASTA version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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