 |
| Job Description | Q5SQX6 | | Confidence | 6.35% | Date | Wed Jul 10 14:11:20 BST 2013 |
| Rank | 78 | Aligned Residues | 85 |
| % Identity | 16% | Template | c4d8mA_ |
| PDB info |
PDB header:lipid binding protein | Chain: A: PDB Molecule:pesticidal crystal protein cry5ba; |
PDBTitle: crystal structure of bacillus thuringiensis cry5b nematocidal toxin
|
| Resolution | 2.30 Å |
|
 |
|   |   |
473 | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Q | A | I | R | N | T | I | Y | A | A | L | Q | D | F | A | Q | V | T | L | R | E | P | L | R | Q | A | V | R | K | K | K | N | V | L | I | S | V | L | Q | A | I | R | K | T | I | C | D | W | E | G | G | R | E | P | P | N | D | P | C | L |
| Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |   |   |
|
|
|
|   |   |   |   |   |
|
|   |   |
|
|   |
|   |   |
|
|   |   |
|   |
|   |   |   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
| Template Conservation |   |
  |   |   |
|   |   |   |
|   |   |
|
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|   |   |   |
|   |   |
|   |   |
|
|   |   |
|   |   | . | . | . | . | . | . | . | . | . | . |
| Template Sequence |   |
Q | Q | L | F | N | A | I | M | D | A | V | N | K | M | V | D | N | K | F | L | S | Y | N | L | S | T | L | N | K | T | I | E | G | L | Q | G | N | L | G | L | F | Q | N | A | I | Q | V | A | I | C | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
| Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . | . | . | . | . |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | |
|
|
|
|
|
|
|
|
|
|   |
|   |   |
533 | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
R | G | E | K | D | P | K | G | G | F | D | I | K | V | P | R | R | A | V | G | P | S | S | T | Q | L | Y | M | V | R | T | M | L | E | S | L |
| Query Conservation |   |
  |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |
|
|   |   |
|
|
|   |
|   |   |
|
| Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
. |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
| Template Sequence |   |
. |
Q | G | S | T | P | E | R | F | D | Q | N | C | T | P | C | N | P | N | Q | P | C | K | D | D | L | D | R | V | A | S | R | F | D | T | A |
| Template Known Secondary structure |   |
. |
|
|
|
|
|
|
|
|
| T | T | T | S | S |
|
| T | T | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
164 | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
Phyre2 is part of Genome3D |
|