Job Description Q5SQX6 Confidence 6.46% Date Wed Jul 10 14:11:20 BST 2013 Rank 74 Aligned Residues 89 % Identity 20% Template c3oqhB_ PDB info PDB header:ligase Chain: B: PDB Molecule:putative uncharacterized protein yvmc; PDBTitle: crystal structure of b. licheniformis cdps yvmc-blic Resolution 1.90 Å

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		985	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	E	L	K	T	D	V	F	Q	S	L	R	E	V	G	N	A	I	L	F	C	L	L	I	E	Q	A	L	S	Q	E	E	V	C	D	L	L	H	A	A	P	F	Q	N	I	L	P	R	V	Y	I	K	E	G	E	R	L	E	V
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.						.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.						.	.
Template Sequence		Y	R	N	L	R	M	E	V	E	A	A	F	F	D	.	.	.	.	.	.	.	.	.	.	.	Q	T	H	F	R	.	.	N	A	C	L	E	M	S	H	A	A	I	L	G	R	A	R	G	T	R	M	D	V	V	E	V	S	A	D
Template Known Secondary structure																.	.	.	.	.	.	.	.	.	.	.						.	.												S	S	B			T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.						.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.												140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		1045	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	K	R	L	E	A	K	Y	A	P	L	H	L	V	P	L	I	E	R	L	G	T	P	Q	Q	I	A	I	A	R	E	G	D	L	L	T	K	E	R	L	C	C	G	L	S	M	F	E	V	I	L	T	R	I	R	S	Y	L	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	V	E	Y	V	I	A	E	L	P	F	F	I	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.										T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																															173	.	.														.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		1105	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.		.	.	.	.	.	1130	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		D	P	I	W	R	G	P	P	P	T	N	G	V	M	H	V	D	E	C	V	.	E	F	H	R	L	W	S	A	M	Q	F	V	Y
Query Conservation																						.
Alig confidence				.	.	.	.	.	.	.	.	.										.
Template Conservation				.	.	.	.	.	.	.	.	.
Template Sequence		A	P	.	.	.	.	.	.	.	.	.	D	I	L	G	V	E	E	T	L	L	A	Y	H	R	P	W	K	L	G	E	Q	I	S
Template Known Secondary structure				.	.	.	.	.	.	.	.	.				T		S							S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.
Template SS confidence
		191	.										.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D