Job Description Q5SQX6 Confidence 6.35% Date Wed Jul 10 14:11:20 BST 2013 Rank 79 Aligned Residues 60 % Identity 13% Template c2zbkA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:type ii dna topoisomerase vi subunit a; PDBTitle: crystal structure of an intact type ii dna topoisomerase:2 insights into dna transfer mechanisms Resolution 3.56 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1093	.	.	.	.	.	.	1100	.	.	.	.	.				.	.	.	.	1110	.	.	.	.	.	.	.								.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.
Predicted Secondary structure															.	.	.													.	.	.	.	.	.	.
Query SS confidence															.	.	.													.	.	.	.	.	.	.
Query Sequence		E	V	I	L	T	R	I	R	S	Y	L	Q	D	.	.	.	P	I	W	R	G	P	P	P	T	N	G	V	.	.	.	.	.	.	.	M	H	V	D	E	C	V	E	F	H	R	L	W	S	A	M	Q	F	V	Y	C	I	P	V	G
Query Conservation															.	.	.													.	.	.	.	.	.	.
Alig confidence															.	.	.													.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	K	A	A	N	I	L	R	D	K	F	L	N	L	V	E	Q	L	K	K	G	E	P	L	V	M	E	I	P	M	L	R	R	N	F	L	D	L	N	E	A	K	R	F	M	Q	T	V	L	M	A	S	I	I	Y	D	A	L	V	S
Template Known Secondary structure								T	T													S	S													T	T	S	S	T	T											T									T
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		1143	.	.	.	.	.	.	1150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	E	F	T	A	E	Q	C	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	Y	P	T	I	R	D	L	Y
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D