Job Description Q5SQX6 Confidence 14.27% Date Wed Jul 10 14:11:20 BST 2013 Rank 29 Aligned Residues 184 % Identity 13% Template c2p7nA_ PDB info PDB header:cell invasion Chain: A: PDB Molecule:pathogenicity island 1 effector protein; PDBTitle: crystal structure of the pathogenicity island 1 effector2 protein from chromobacterium violaceum. northeast3 structural genomics consortium (nesgc) target cvr69. Resolution 2.80 Å

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		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																																						.	.	.
Query SS confidence																																						.	.	.
Query Sequence		V	H	S	S	M	N	E	M	L	E	E	G	H	D	Y	A	V	M	L	Y	T	W	R	S	C	S	R	A	I	P	Q	V	K	C	N	E	.	.	.	Q	P	N	R	V	E	I	Y	E	K	T	V	E	V	L	E	P	E	V	T	K
Query Conservation																																						.	.	.
Alig confidence																				.	.	.																.	.	.
Template Conservation																				.	.	.
Template Sequence		X	L	Y	S	A	N	A	A	A	G	Q	G	X	A	D	S	D	L	.	.	.	W	D	X	I	S	D	Q	I	G	K	I	K	D	N	Y	L	G	V	Y	E	N	V	V	G	Q	Y	T	D	F	Y	K	A	F	S	D	I	L	S	Q
Template Known Secondary structure												T								.	.	.															T
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.																		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	M	K	F	M	Y	F	Q	R	K	A	I	E	R	F	C	S	E	V	K	R	L	C	H	A	E	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	F	V	S	E	A	Y	L	L	T	L	G	K	F
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	A	N	W	I	K	L	N	V	D	A	L	K	A	A	L	E	K	L	K	K	D	F	S	L	G	D	N	L	D	N	K	K	A	V	L	F	P	A	Q	S	K	D	G	G	I	Q	G	G	S	E	S	D	A	R	K	W	A	K	E
Template Known Secondary structure			G	G	G																			T	S			T	T	S			S	T	T				S				S	S	S					B
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.
Query Sequence		I	N	M	F	A	V	L	D	E	L	K	N	M	K	C	S	.	.	.	.	.	.	.	V	K	N	D	H	S	A	Y	K	R	A	A	Q	F	L	R	K	M	A	D	P	Q	S	I	Q	E	S	Q	N	L	S	M	F	L	A	N	H
Query Conservation																		.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	G	L	P	D	A	P	P	P	G	F	S	C	V	Q	K	A	A	D	G	N	W	V	V	V	V	D	X	T	P	I	D	T	X	I	R	D	V	G	A	L	G	S	G	T	L	E	L	D	N	A	K	F	Q	A	W	Q	S	G	F
Template Known Secondary structure		T	T						T	T	S			S					T	T	S	S																				T									T	T	T
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.									.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.
Query Sequence		N	R	I	T	Q	C	L	H	Q	Q	L	E	V	I	P	G	.	.	.	.	.	.	.	.	Y	E	E	L	L	A	D	I	V	N	I	C	V	D	Y	Y	E	N
Query Conservation																		.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	Q	E	E	N	L	K	N	T	L	Q	T	L	T	Q	K	Y	S	N	A	N	S	L	F	D	N	L	V	K	V	L	S	S	T	I	S	S	C	L	E	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D