Job Description Q5SQX6 Confidence 6.10% Date Wed Jul 10 14:11:20 BST 2013 Rank 87 Aligned Residues 78 % Identity 12% Template c1wpaA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:occludin; PDBTitle: 1.5 angstrom crystal structure of human occludin fragment2 413-522 Resolution 1.50 Å

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		444	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.						.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.
Query SS confidence																																					.	.	.	.	.
Query Sequence		S	E	E	K	F	A	F	V	E	V	I	A	M	I	K	G	L	Q	V	L	M	G	R	M	E	S	V	F	N	Q	A	I	R	N	T	.	.	.	.	.	I	Y	A	A	L	Q	D	F	A	Q	V	T	L	R	E	P	L	R	Q	A
Query Conservation																																					.	.	.	.	.
Alig confidence																																					.	.	.	.	.													.
Template Conservation																																																						.
Template Sequence		D	T	G	L	Q	E	Y	K	S	L	Q	S	E	L	D	E	I	N	K	E	L	S	R	L	D	K	E	L	D	D	Y	R	E	E	S	E	E	Y	M	A	A	A	D	E	Y	N	R	L	K	Q	V	K	.	G	S	A	D	Y	K	S
Template Known Secondary structure																																S		T	T	S																		.	T	S
Template Predicted Secondary structure																																																						.
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.		.	490	.	.	.	.	.
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	K	K	K	N	V	L	I	S	V	L	Q	A	I	R	K	T	I	C	D	W	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	N	H	C	K	Q	L	K	S	K	L	S	H	I	K	K	M	V	G	D	Y	D	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D