27/07/2013 06:06:11 : INFO  : Run start: Sat Jul 27 06:06:11 BST 2013
27/07/2013 06:06:11 : INFO  : Initialised job
27/07/2013 06:06:11 : INFO  : Initialised job:
Sequence
>batch____
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHDYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI
SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD
KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY
AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG
GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSFF
FTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM
EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV
LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD
QAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITL
HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI
YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR
LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD
LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLL
TKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIP
VGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL
KKMADRIRKYQILNNEVFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATTC

27/07/2013 06:06:11 : INFO  : Checked sequence
27/07/2013 06:06:12 : INFO  : Finding homologues with PSI-BLAST
27/07/2013 06:06:12 : INFO  : PSI-BLAST 3 iterations
27/07/2013 06:11:42 : INFO  : PSI-BLAST 5 iterations
27/07/2013 06:14:01 : INFO  : Finished PSI-BLAST
27/07/2013 06:14:01 : INFO  : Running Buildali to generate a3m file
27/07/2013 06:18:59 : INFO  : Converting to HMM
27/07/2013 06:19:00 : INFO  : Calibrating HMM
27/07/2013 06:19:23 : INFO  : Searching HMM database
27/07/2013 06:47:31 : INFO  : Finished buildali
27/07/2013 06:47:31 : INFO  : Predicting secondary structure
27/07/2013 06:47:33 : INFO  : Predicted secondary structure (PSI-Pred)
27/07/2013 06:47:33 : INFO  : Predicting Disordered regions
27/07/2013 06:47:33 : INFO  : Predicted Disorder (Disopred)
27/07/2013 06:47:33 : INFO  : Running memsat_svm check
27/07/2013 06:47:55 : INFO  : Globular protein
27/07/2013 06:47:55 : INFO  : Predicted Transmembrane (memsat_svm) ID '1965ac2a29e64fe2'
27/07/2013 06:47:56 : INFO  : Initialising fold library search
27/07/2013 06:47:56 : INFO  : Initialised search input
27/07/2013 06:47:56 : INFO  : Building Ensemble models
27/07/2013 06:47:57 : INFO  : Building hh.c3p8cA_.model.1.pdb
27/07/2013 06:47:58 : INFO  : Building c3p8cA_.1.pdb
27/07/2013 06:47:59 : INFO  : Building c3p8cB_.2.pdb
27/07/2013 06:48:00 : INFO  : Building d1ug8a_.3.pdb
27/07/2013 06:48:01 : INFO  : Building d1ayia_.4.pdb
27/07/2013 06:48:01 : INFO  : Building d2vlqa1.5.pdb
27/07/2013 06:48:01 : INFO  : Building c2no8A_.6.pdb
27/07/2013 06:48:02 : INFO  : Building c1i5pA_.7.pdb
27/07/2013 06:48:03 : INFO  : Building d1gxha_.8.pdb
27/07/2013 06:48:04 : INFO  : Building c2c9kA_.9.pdb
27/07/2013 06:48:04 : INFO  : Building d1g5ma_.10.pdb
27/07/2013 06:48:05 : INFO  : Building c2iv1J_.11.pdb
27/07/2013 06:48:06 : INFO  : Building c1gs0B_.12.pdb
27/07/2013 06:48:07 : INFO  : Building d1dwka2.13.pdb
27/07/2013 06:48:08 : INFO  : Building c3mhkA_.14.pdb
27/07/2013 06:48:08 : INFO  : Building c2wukD_.15.pdb
27/07/2013 06:48:09 : INFO  : Building d2ca5a1.16.pdb
27/07/2013 06:48:10 : INFO  : Building d1o7xa_.17.pdb
27/07/2013 06:48:10 : INFO  : Building d1niga_.18.pdb
27/07/2013 06:48:14 : INFO  : Building c2paxA_.19.pdb
27/07/2013 06:48:14 : INFO  : Building d1m6ex_.20.pdb
27/07/2013 06:48:27 : INFO  : Finished HH model building
27/07/2013 06:48:27 : WARN  : Set python to /bmm/www/servers/phyre2/bin//python2.7/2.7.2/bin/python2.7
27/07/2013 06:48:43 : INFO  : html domain output complete ID '1965ac2a29e64fe2'
27/07/2013 10:22:43 : INFO  : Run end  : Sat Jul 27 10:22:43 BST 2013
