Phyre 2 alignment of Q5SQX6 with c3ongA_

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Job Description | Q5SQX6
Confidence | 8.20% | Date | Wed Jul 10 14:11:20 BST 2013
Rank | 53 | Aligned Residues | 43
% Identity | 14% | Template | c3ongA_
PDB info | PDB header:ligase | Chain: A: PDB Molecule:ubiquitin-activating enzyme e1-like; | PDBTitle: crystal structure of uba2ufd-ubc9: insights into e1-e2 interactions in2 sumo pathways
Resolution | 2.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | H | V | T | L | E | D | A | L | S | N | V | D | L | L | E | E | L | P | L | P | D | Q | Q | P | C | I | E | P | P | P | S | S | I | M | Y | Q | A | N | F | D | T | N | F | E | D
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | M | K | L | S | D | F | V | V | . | . | L | I | R | E | K | Y | S | Y | P | Q | D | I | S | L | L | D | A | S | N | Q | R | L | L | F | D | Y | D | F | E | D | L | N | D | R
Template Known Secondary structure |  | T |  | B |  |  |  |  |  |  | . | . |  |  |  |  |  |  | T |  |  | S | S |  |  |  |  |  | T | T | T | T |  |  |  |  |  | S | S |  |  | T | T | T | T | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 455 | . | . | . | . | 460 | . | . | . |  |  | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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