Phyre 2 alignment of Q5SQX6 with c2dlrA_

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Job Description | Q5SQX6
Confidence | 8.16% | Date | Wed Jul 10 14:11:20 BST 2013
Rank | 54 | Aligned Residues | 56
% Identity | 11% | Template | c2dlrA_
PDB info | PDB header:signaling protein | Chain: A: PDB Molecule:regulator of g-protein signaling 10; | PDBTitle: solution structure of the rgs domain of human regulator of2 g-protein signaling 10
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 824 | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . | . | . | . | . | . | . | 880 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | R | E | A | N | H | N | V | S | A | P | Y | G | R | I | T | L | H | V | F | W | E | L | N | F | D | F | L | P | N | Y | C | Y | N | G | S | T | N | R | F | V | R | T | A | I | P | F | T | Q | E | P | Q | R | D | K | P | A | N | V | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | K | I | L | E | E | P | H | P | L | M | F | Q | K | L | Q | D | Q | I | F | N | L | M | K | Y | D | S | Y | S | R | F | L | K | S | D | L | F | L | K | H | K | R | T | . | . | . | . | . | . | E | E | E | E | E | D | L | P | S | G | P
Template Known Secondary structure |  |  |  |  |  |  | S |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  | S |  |  |  |  | S | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |  |  |  |  |  |  | . | . | . | . | 140 | . | . | . | . | . | .
|  | 884 | .
Predicted Secondary structure |  |  |
Query SS confidence |  |  |
Query Sequence |  | P | Y
Query Conservation |  |  |
Alig confidence |  |  |
Template Conservation |  |  |
Template Sequence |  | S | S
Template Known Secondary structure |  |  |
Template Predicted Secondary structure |  |  |
Template SS confidence |  |  |
|  | 147 | .

Download: | Text version | FASTA version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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