Phyre 2 alignment of Q5SQX6 with d1m6ex_

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Job Description | Q5SQX6
Confidence | 19.37% | Date | Wed Jul 10 14:11:20 BST 2013
Rank | 20 | Aligned Residues | 51
% Identity | 22% | Template | d1m6ex_
SCOP info | S-adenosyl-L-methionine-dependent methyltransferases | S-adenosyl-L-methionine-dependent methyltransferases | Salicylic acid carboxyl methyltransferase (SAMT)
Resolution | 3.00
Model Dimensions (Å) | X:38.010 Y:36.083 Z:19.824

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 788 | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . |  |  |  |  |  |  |  |  |  | . |  |  | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 |  |  |  |  |  |
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | .
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | .
Query Sequence |  | S | E | D | L | T | S | I | V | E | L | E | W | L | L | E | I | N | R | L | T | H | R | L | L | C | K | . | . | . | . | . | . | . | . | . | H | . | . | M | T | L | D | S | F | D | A | M | F | R | E | A | N | H | N | . | . | . | . | . | .
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | .
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | .
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | S | S | G | P | N | A | L | F | A | V | T | E | L | I | K | T | V | E | E | L | R | K | K | M | G | R | E | N | S | P | E | Y | Q | I | F | L | N | D | L | P | G | N | D | F | N | A | I | F | R | S | L | P | I | E | N | D | V | D | G | V
Template Known Secondary structure |  |  | S | S | T | T | T | T | T | G | G | G | T | T |  |  |  |  |  |  |  |  |  | S | S | S |  | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  | T | T | T | T | T | S |  | S |  | T | T |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 61 | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
|  |  |  |  |  |  |  | 831 | . | . | . | . | . | . | .
Predicted Secondary structure |  | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |  | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query Sequence |  | . | . | . | . | . | . | V | S | A | P | Y | G | R | I
Query Conservation |  | . | . | . | . | . | . |  |  |  |  |  |  |  |
Alig confidence |  | . | . | . | . | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | C | F | I | N | G | V | P | G | S | F | Y | G | R | L
Template Known Secondary structure |  |  |  |  |  |  |  |  | S |  | S | S | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 121 | . | . | . | . | . | . | . | . | 130 | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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