Phyre 2 alignment of Q5SQX6 with c1gs0B_

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Job Description | Q5SQX6
Confidence | 24.03% | Date | Wed Jul 10 14:11:20 BST 2013
Rank | 12 | Aligned Residues | 42
% Identity | 21% | Template | c1gs0B_
PDB info | PDB header:transferase | Chain: B: PDB Molecule:poly (adp-ribose) polymerase-2; | PDBTitle: crystal structure of the catalytic fragment of murine poly2 (adp-ribose) polymerase-2
Resolution | 2.8 Å
Model Dimensions (Å) | X:37.067 Y:38.925 Z:20.729

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 1107 | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | . | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . | . | . | 1150 | . | . | . | . | . | . | . | . | . | 1160 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | W | R | G | P | P | P | T | N | G | V | M | H | V | D | E | C | V | E | F | H | R | L | W | S | A | M | Q | F | V | Y | C | I | P | V | G | T | N | E | F | T | A | E | Q | C | F | G | D | G | L | N | W | A | G | C | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | W | H | G | S | R | L | S | N | . | . | . | . | . | . | . | . | . | . | . | . | . | W | V | G | I | L | S | H | G | L | R | V | A | P | P | E | A | P | I | T | G | Y | . | M | F | G | K | G | I | Y | F | A | D | M | S
Template Known Secondary structure |  |  |  |  |  |  |  | G | G | G | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | S |  |  |  |  | S | S | S |  | G | G | G | S | . | T | T | S | S | S |  |  |  | B | S | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 402 | . | . | . | . | . | . | . | 410 |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . |  | . | . | . | . | . | . | . | . | 440 | . | . | .

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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