Phyre 2 alignment of Q5SQX6 with d1ug8a_

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Job Description | Q5SQX6
Confidence | 49.56% | Date | Wed Jul 10 14:11:20 BST 2013
Rank | 3 | Aligned Residues | 31
% Identity | 23% | Template | d1ug8a_
SCOP info | IF3-like | R3H domain | R3H domain
Resolution | UNK
Model Dimensions (Å) | X:38.580 Y:18.126 Z:22.656

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 1091 | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | F | E | V | I | L | T | R | I | R | S | Y | L | Q | D | P | I | W | R | G | P | P | P | T | N | G | V | M | H | V | D | E | C | V | E | F | H | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | I | D | Q | V | I | E | K | I | E | D | F | L | Q | S | E | . | . | . | . | . | . | . | E | K | R | S | L | E | L | D | P | C | T | G | F | Q | R
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | . | . | . | . | . | . | . | S |  |  |  |  |  |  |  |  |  |  | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . |  |  |  |  |  |  |  | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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