Phyre 2 alignment of Q5SQX6 with c2no8A_

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Job Description | Q5SQX6
Confidence | 45.00% | Date | Wed Jul 10 14:11:20 BST 2013
Rank | 6 | Aligned Residues | 37
% Identity | 24% | Template | c2no8A_
PDB info | PDB header:immune system | Chain: A: PDB Molecule:colicin-e2 immunity protein; | PDBTitle: nmr structure analysis of the colicin immuntiy protein im2
Resolution | UNK
Model Dimensions (Å) | X:29.053 Y:25.871 Z:23.598

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 647 | . | . | 650 | . | . | . | . |  | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | T | D | H | I | L | E | T | . | K | E | P | S | M | M | E | Y | V | L | Y | P | L | D | L | Y | N | D | S | A | Y | Y | A | L | T | K | F | K | K
Query Conservation |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | V | R | E | F | E | R | L | T | E | H | P | D | G | S | D | L | I | Y | Y | P | R | D | D | R | E | D | S | P | E | G | I | V | K | E | I | K | E
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  | S |  |  | S | S | S |  |  | S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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