Job Description Q03526 Confidence 100.00% Date Wed Jul 10 14:09:50 BST 2013 Rank 129 Aligned Residues 251 % Identity 30% Template c4ithB_ PDB info PDB header:transferase/transferase inhibitor Chain: B: PDB Molecule:receptor-interacting serine/threonine-protein kinase 1; PDBTitle: crystal structure of rip1 kinase in complex with necrostatin-1 analog Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		373	.	.	.	.	.	.						380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.				.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure									.	.	.	.	.																											.	.	.
Query SS confidence									.	.	.	.	.																											.	.	.
Query Sequence		E	I	G	S	G	Q	F	.	.	.	.	.	G	L	V	H	L	G	Y	W	L	N	K	D	K	V	A	I	K	T	I	Q	E	G	A	M	S	E	.	.	.	E	D	F	I	E	E	A	E	V	M	M	K	L	S	H	P	K	L	V
Query Conservation									.	.	.	.	.																											.	.	.
Alig confidence									.	.	.	.	.																											.	.	.
Template Conservation
Template Sequence		K	M	K	S	S	D	F	L	E	S	A	E	L	K	V	S	L	A	F	H	R	T	Q	G	L	M	I	M	K	T	V	Y	K	G	P	N	C	I	E	H	N	E	A	L	L	E	E	A	K	M	M	N	R	L	R	H	S	R	V	V
Template Known Secondary structure					G	G	G	B		S			B									T	T	T											S		T	T																T			B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		425	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	Y	G	V	C	L	E	Q	A	P	I	C	L	V	F	E	F	M	E	H	G	C	L	S	D	Y	L	R	S	Q	R	G	L	F	A	A	E	T	L	L	G	M	C	L	D	V	C	E	G	M	A	Y	L	E	K	A	C	V	I
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		K	L	L	G	V	I	I	E	E	G	K	Y	S	L	V	M	E	Y	M	E	K	G	N	L	M	H	V	L	.	K	A	E	M	S	T	P	L	S	V	K	G	R	I	I	L	E	I	I	E	G	M	A	Y	L	H	G	K	G	V	I
Template Known Secondary structure										T	T										T	T		B						.	T	S	S	S																								T	T
Template Predicted Secondary structure																														.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.			.	.	540	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		H	R	D	L	A	A	R	N	C	L	V	G	E	N	Q	V	I	K	V	S	D	F	G	M	T	R	F	V	L	D	D	Q	Y	T	S	S	T	G	T	K	F	P	V	K	W	A	S	P	E	V	F	S	F	.	.	S	R	Y	S	S
Query Conservation																																																							.	.
Alig confidence																																																							.	.
Template Conservation
Template Sequence		H	K	D	L	K	P	E	N	I	L	V	D	N	D	F	H	I	K	I	A	D	L	G	L	A	S	F	K	M	W	S	K	L	N	N	E	E	H	N	E	G	T	L	Y	Y	M	A	P	E	H	L	N	D	V	N	A	K	P	T	E
Template Known Secondary structure			S			S	G	G	G					T	T								T	T		T	T		S						T	T	S	S	S				G	G	G	T	S		G	G	G	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.		.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.				.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.																					.	.	.
Query SS confidence																										.																					.	.	.
Query Sequence		K	S	D	V	W	S	F	G	V	L	M	W	E	V	F	S	E	G	K	I	P	Y	E	N	.	R	S	N	S	E	V	V	E	D	I	S	T	G	F	R	L	Y	K	P	R	.	.	.	L	A	S	C	H	V	Y	Q	I	M	N	H
Query Conservation																										.																					.	.	.
Alig confidence																		.								.																					.	.	.
Template Conservation																		.
Template Sequence		K	S	D	V	Y	S	F	A	V	V	L	W	A	I	F	A	.	N	K	E	P	Y	E	N	A	I	A	E	Q	Q	L	I	M	A	I	K	S	G	N	R	P	D	V	D	D	I	T	E	Y	C	P	R	E	I	I	S	L	M	K	L
Template Known Secondary structure																		.	S	S		S		T	T													T	T					G	G	G			S
Template Predicted Secondary structure																		.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		599	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	W	K	E	K	P	E	D	R	P	P	F	S	Q	L	L	S	Q	L	A	E	I	A	E	A	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	W	E	A	N	P	E	A	R	P	T	F	P	G	I	E	E	K	F	R	P	F	Y	L	S	Q	L
Template Known Secondary structure			T		S	S	G	G	G	S																		T
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions	Phyre2 is part of Genome3D